RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MCM6Q14566 821 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 KCNG4Q8TDN1 519 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 NEK1Q96PY6 1258 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 WDR24Q96S15 920 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 FAN1Q9Y2M0 1017 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 ABCC6O95255 1503 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 RGPD1P0DJD0 1748 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 MYH15Q9Y2K3 1946 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 ALDH1L1O75891 902 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 SERPINC1P01008 464 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 TMEM139Q8IV31 216 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 BAG1Q99933 345 aaPredicted RBP14.73□□□□□ -0.05
SMAD1-215ENST00000515385 PCDHA7Q9UN72 937 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 SBNO1A3KN83 1393 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 MON2Q7Z3U7 1717 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 A0A087WWV3 80 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 CUTAO60888 179 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 ATP6V1AP38606 617 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 DHX58Q96C10 678 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 FAM227BQ96M60 508 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 TCEANC2Q96MN5 208 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 AKAP2Q9Y2D5 859 aa14.73□□□□□ -0.05
SMAD1-215ENST00000515385 CPS1P31327 1500 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 HMGB1P09429 215 aaKnown RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 MYL5Q02045 173 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 MLECQ14165 292 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 FOXR1Q6PIV2 292 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 CNNM3Q8NE01 707 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 ANKRD20A12PQ8NF67 263 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 CTCFLQ8NI51 663 aaPredicted RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 ANKZF1Q9H8Y5 726 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 VIPAS39Q9H9C1 493 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 TMEM131LA2VDJ0 1609 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 WASLO00401 505 aaPredicted RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 YEATS4O95619 227 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 LMOD1P29536 600 aaPredicted RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 MAP2K2P36507 400 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 CFAP100Q494V2 611 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
SMAD1-215ENST00000515385 FBXW7Q969H0 707 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 CDC23Q9UJX2 597 aa14.72□□□□□ -0.05
SMAD1-215ENST00000515385 C3P01024 1663 aa14.71□□□□□ -0.05
SMAD1-215ENST00000515385 NDUFA8P51970 172 aa14.71□□□□□ -0.05
SMAD1-215ENST00000515385 SCRN1Q12765 414 aa14.71□□□□□ -0.05
SMAD1-215ENST00000515385 TBX2Q13207 712 aaPredicted RBP14.71□□□□□ -0.05
SMAD1-215ENST00000515385 SART3Q15020 963 aaKnown RBP14.71□□□□□ -0.05
SMAD1-215ENST00000515385 Q6ZUG5 572 aa14.71□□□□□ -0.05
SMAD1-215ENST00000515385 FAM177A1Q8N128 213 aaPredicted RBP14.71□□□□□ -0.05
SMAD1-215ENST00000515385 CCDC12Q8WUD4 166 aaPredicted RBP14.71□□□□□ -0.05
SMAD1-215ENST00000515385 RBM28Q9NW13 759 aaKnown RBP14.71□□□□□ -0.05
SMAD1-215ENST00000515385 SF3A1Q15459 793 aaKnown RBP14.7□□□□□ -0.06
SMAD1-215ENST00000515385 FMNL2Q96PY5 1086 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
SMAD1-215ENST00000515385 A0A1B0GVL5 298 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 CASP8Q14790 479 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 LINC00301Q8NCQ3 95 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 PLCD4Q9BRC7 762 aa14.7□□□□□ -0.06
SMAD1-215ENST00000515385 FTOQ9C0B1 505 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMAD1-215ENST00000515385 LRRC37A3O60309 1634 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 A0A0D9SFI3 127 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 TAF5LO75529 589 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 ERLIN2O94905 339 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 AARSP49588 968 aaKnown RBP eCLIP14.69□□□□□ -0.06
SMAD1-215ENST00000515385 TRDNQ13061 729 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 STK38Q15208 465 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 TMED8Q6PL24 325 aaPredicted RBP14.69□□□□□ -0.06
SMAD1-215ENST00000515385 MICALL1Q8N3F8 863 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 CCDC102AQ96A19 550 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 FSD1Q9BTV5 496 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 HSD3B7Q9H2F3 369 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 ABCB6Q9NP58 842 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 POLR3EQ9NVU0 708 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 TUBE1Q9UJT0 475 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.69□□□□□ -0.06
SMAD1-215ENST00000515385 CCDC61Q9Y6R9 512 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
SMAD1-215ENST00000515385 NEDD4P46934 1319 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 PTPDC1A2A3K4 754 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 ZNF202O95125 648 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 MCM3P25205 808 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
SMAD1-215ENST00000515385 AACSQ86V21 672 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
SMAD1-215ENST00000515385 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
SMAD1-215ENST00000515385 CCDC175P0C221 793 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 CMA1P23946 247 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 PIP4K2BP78356 416 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 OLFM4Q6UX06 510 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 BICC1Q9H694 974 aaKnown RBP14.68□□□□□ -0.06
SMAD1-215ENST00000515385 FAM204AQ9H8W3 233 aa14.68□□□□□ -0.06
SMAD1-215ENST00000515385 KIF5CO60282 957 aa14.67□□□□□ -0.06
SMAD1-215ENST00000515385 N4BP1O75113 896 aaKnown RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 NBPF7P0C2Y1 421 aaPredicted RBP14.67□□□□□ -0.06
SMAD1-215ENST00000515385 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms