RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 FANCIQ9NVI1 1328 aa29.14■■■□□ 2.25
SMAD1-214ENST00000514831 ALDH1A1P00352 501 aa29.13■■■□□ 2.25
SMAD1-214ENST00000514831 CCDC184Q52MB2 194 aa29.13■■■□□ 2.25
SMAD1-214ENST00000514831 SNAP23O00161 211 aa29.12■■■□□ 2.25
SMAD1-214ENST00000514831 R3HDMLQ9H3Y0 253 aa29.12■■■□□ 2.25
SMAD1-214ENST00000514831 FZD1Q9UP38 647 aa29.12■■■□□ 2.25
SMAD1-214ENST00000514831 MANSC4A6NHS7 340 aaPredicted RBP29.11■■■□□ 2.25
SMAD1-214ENST00000514831 TAF5LO75529 589 aa29.11■■■□□ 2.25
SMAD1-214ENST00000514831 ZBTB48P10074 688 aaPredicted RBP29.11■■■□□ 2.25
SMAD1-214ENST00000514831 IL1R1P14778 569 aa29.11■■■□□ 2.25
SMAD1-214ENST00000514831 FKBP1AP62942 108 aaKnown RBP29.11■■■□□ 2.25
SMAD1-214ENST00000514831 IFIT5Q13325 482 aaKnown RBP29.11■■■□□ 2.25
SMAD1-214ENST00000514831 INHBEP58166 350 aa29.1■■■□□ 2.25
SMAD1-214ENST00000514831 FOXO4P98177 505 aa29.1■■■□□ 2.25
SMAD1-214ENST00000514831 ZNF804AQ7Z570 1209 aa29.1■■■□□ 2.25
SMAD1-214ENST00000514831 ARAP2Q8WZ64 1704 aa29.1■■■□□ 2.25
SMAD1-214ENST00000514831 SPDYE2BA6NHP3 402 aa29.09■■■□□ 2.25
SMAD1-214ENST00000514831 SPDYE6P0CI01 402 aa29.09■■■□□ 2.25
SMAD1-214ENST00000514831 HELBQ8NG08 1087 aaPredicted RBP29.09■■■□□ 2.25
SMAD1-214ENST00000514831 PCDHAC2Q9Y5I4 1007 aa29.09■■■□□ 2.25
SMAD1-214ENST00000514831 OTOFQ9HC10 1997 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 UNCXA6NJT0 531 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 MYO1BO43795 1136 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 PPP1R12BO60237 982 aaPredicted RBP29.08■■■□□ 2.25
SMAD1-214ENST00000514831 CFAP100Q494V2 611 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 IFNL1Q8IU54 200 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 SLC10A4Q96EP9 437 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 WNK4Q96J92 1243 aa29.08■■■□□ 2.25
SMAD1-214ENST00000514831 VAMP4O75379 141 aa29.07■■■□□ 2.24
SMAD1-214ENST00000514831 CLMNQ96JQ2 1002 aa29.07■■■□□ 2.24
SMAD1-214ENST00000514831 F8W031 263 aaPredicted RBP29.06■■■□□ 2.24
SMAD1-214ENST00000514831 CHMP3Q9Y3E7 222 aa29.06■■■□□ 2.24
SMAD1-214ENST00000514831 CLRN2A0PK11 232 aa29.05■■■□□ 2.24
SMAD1-214ENST00000514831 SUPT20HL1Q3ZLR7 823 aa29.05■■■□□ 2.24
SMAD1-214ENST00000514831 BEND3Q5T5X7 828 aa29.05■■■□□ 2.24
SMAD1-214ENST00000514831 PRMT6Q96LA8 375 aaPredicted RBP29.05■■■□□ 2.24
SMAD1-214ENST00000514831 RBBP6Q7Z6E9 1792 aaKnown RBP29.04■■■□□ 2.24
SMAD1-214ENST00000514831 IGF2BP3O00425 579 aaKnown RBP eCLIP29.04■■■□□ 2.24
SMAD1-214ENST00000514831 F6X3S4 739 aa29.03■■■□□ 2.24
SMAD1-214ENST00000514831 VEZTQ9HBM0 779 aa29.03■■■□□ 2.24
SMAD1-214ENST00000514831 AOX1Q06278 1338 aa29.02■■■□□ 2.24
SMAD1-214ENST00000514831 NBPF12Q5TAG4 269 aaPredicted RBP29.02■■■□□ 2.24
SMAD1-214ENST00000514831 LMBR1LQ6UX01 489 aa29.02■■■□□ 2.24
SMAD1-214ENST00000514831 IREB2P48200 963 aaKnown RBP29.01■■■□□ 2.23
SMAD1-214ENST00000514831 EXOSC9Q06265 439 aaKnown RBP29.01■■■□□ 2.23
SMAD1-214ENST00000514831 CCDC57Q2TAC2 916 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 EPHA10Q5JZY3 1008 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 LDHAL6AQ6ZMR3 332 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 OTOP1Q7RTM1 612 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 WDR63Q8IWG1 891 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 JAG2Q9Y219 1238 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 TRIM17Q9Y577 477 aa29.01■■■□□ 2.23
SMAD1-214ENST00000514831 FAM205AQ6ZU69 1335 aa29■■■□□ 2.23
SMAD1-214ENST00000514831 GRM8O00222 908 aa29■■■□□ 2.23
SMAD1-214ENST00000514831 ZBTB4Q9P1Z0 1013 aaPredicted RBP29■■■□□ 2.23
SMAD1-214ENST00000514831 RASA3Q14644 834 aa28.99■■■□□ 2.23
SMAD1-214ENST00000514831 TAF7LQ5H9L4 462 aa28.99■■■□□ 2.23
SMAD1-214ENST00000514831 ANKRD13AQ8IZ07 590 aa28.99■■■□□ 2.23
SMAD1-214ENST00000514831 ZNF594Q96JF6 807 aaPredicted RBP28.99■■■□□ 2.23
SMAD1-214ENST00000514831 CNNM1Q9NRU3 951 aa28.99■■■□□ 2.23
SMAD1-214ENST00000514831 HTTP42858 3142 aa28.98■■■□□ 2.23
SMAD1-214ENST00000514831 USP2O75604 605 aaPredicted RBP28.98■■■□□ 2.23
SMAD1-214ENST00000514831 GJA5P36382 358 aa28.98■■■□□ 2.23
SMAD1-214ENST00000514831 RBM5P52756 815 aaKnown RBP eCLIP28.98■■■□□ 2.23
SMAD1-214ENST00000514831 TNFAIP1Q13829 316 aa28.97■■■□□ 2.23
SMAD1-214ENST00000514831 SPDYE2Q495Y8 402 aa28.97■■■□□ 2.23
SMAD1-214ENST00000514831 OTUD7BQ6GQQ9 843 aa28.97■■■□□ 2.23
SMAD1-214ENST00000514831 ERO1AQ96HE7 468 aa28.97■■■□□ 2.23
SMAD1-214ENST00000514831 PLIN1O60240 522 aa28.96■■■□□ 2.23
SMAD1-214ENST00000514831 MFSD14BQ5SR56 506 aa28.96■■■□□ 2.23
SMAD1-214ENST00000514831 TDRD7Q8NHU6 1098 aaKnown RBP28.96■■■□□ 2.23
SMAD1-214ENST00000514831 TESPA1A2RU30 521 aaPredicted RBP28.95■■■□□ 2.22
SMAD1-214ENST00000514831 CRHR2Q13324 411 aa28.95■■■□□ 2.22
SMAD1-214ENST00000514831 INTS3Q68E01 1043 aaKnown RBP28.95■■■□□ 2.22
SMAD1-214ENST00000514831 SERPINA10Q9UK55 444 aa28.95■■■□□ 2.22
SMAD1-214ENST00000514831 UBE4AQ14139 1066 aa28.94■■■□□ 2.22
SMAD1-214ENST00000514831 MRS2Q9HD23 443 aa28.94■■■□□ 2.22
SMAD1-214ENST00000514831 ZNF70Q9UC06 446 aaPredicted RBP28.94■■■□□ 2.22
SMAD1-214ENST00000514831 C9orf78Q9NZ63 289 aaPredicted RBP28.93■■■□□ 2.22
SMAD1-214ENST00000514831 TTF2Q9UNY4 1162 aaKnown RBP28.93■■■□□ 2.22
SMAD1-214ENST00000514831 ALDH1L1O75891 902 aa28.92■■■□□ 2.22
SMAD1-214ENST00000514831 CD99L2Q8TCZ2 262 aa28.92■■■□□ 2.22
SMAD1-214ENST00000514831 PTPN18Q99952 460 aa28.92■■■□□ 2.22
SMAD1-214ENST00000514831 PTPN22Q9Y2R2 807 aa28.92■■■□□ 2.22
SMAD1-214ENST00000514831 SALL2Q9Y467 1007 aaPredicted RBP28.92■■■□□ 2.22
SMAD1-214ENST00000514831 HIBADHP31937 336 aaKnown RBP28.91■■■□□ 2.22
SMAD1-214ENST00000514831 GYG1P46976 350 aa28.91■■■□□ 2.22
SMAD1-214ENST00000514831 OPTNQ96CV9 577 aa28.91■■■□□ 2.22
SMAD1-214ENST00000514831 TEPSINQ96N21 525 aa28.91■■■□□ 2.22
SMAD1-214ENST00000514831 TDRD3Q9H7E2 651 aaKnown RBP28.91■■■□□ 2.22
SMAD1-214ENST00000514831 POTEFA5A3E0 1075 aa28.9■■■□□ 2.22
SMAD1-214ENST00000514831 FAM84BQ96KN1 310 aaPredicted RBP28.9■■■□□ 2.22
SMAD1-214ENST00000514831 ELP3Q9H9T3 547 aa28.9■■■□□ 2.22
SMAD1-214ENST00000514831 SPINK5Q9NQ38 1064 aaPredicted RBP28.9■■■□□ 2.22
SMAD1-214ENST00000514831 DZIP1LQ8IYY4 767 aaKnown RBP28.89■■■□□ 2.22
SMAD1-214ENST00000514831 GCC1Q96CN9 775 aa28.89■■■□□ 2.22
SMAD1-214ENST00000514831 SRCIN1Q9C0H9 1055 aa28.89■■■□□ 2.22
SMAD1-214ENST00000514831 KIAA0100Q14667 2235 aaKnown RBP28.89■■■□□ 2.21
SMAD1-214ENST00000514831 SP3Q02447 781 aa28.88■■■□□ 2.21
SMAD1-214ENST00000514831 CDAN1Q8IWY9 1227 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms