RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 WWC3Q9ULE0 1092 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 FAM205AQ6ZU69 1335 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 LMNB1P20700 586 aa14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 AOC3Q16853 763 aa14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 HAUS7Q99871 368 aa14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 ZNF277Q9NRM2 450 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 DENND2AQ9ULE3 1009 aa14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 COL1A1P02452 1464 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 SALL1Q9NSC2 1324 aa14.62□□□□□ -0.07
PDLIM5-220ENST00000514830 MYO5AQ9Y4I1 1855 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 MAST2Q6P0Q8 1798 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 MCAMP43121 646 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 PRELPP51888 382 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 ZC3H4Q9UPT8 1303 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-220ENST00000514830 ECE2O60344 883 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 TOMM70O94826 608 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 RASSF7Q02833 373 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 SPATA5Q8NB90 893 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 HMG20BQ9P0W2 317 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 ZNRF3Q9ULT6 936 aa14.6□□□□□ -0.07
PDLIM5-220ENST00000514830 FZD9O00144 591 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 SCARF1Q14162 830 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 STRIP1Q5VSL9 837 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 TMED8Q6PL24 325 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 NIM1KQ8IY84 436 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 TBC1D22AQ8WUA7 517 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 JDP2Q8WYK2 163 aa14.59□□□□□ -0.07
PDLIM5-220ENST00000514830 YDJCA8MPS7 323 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 G3V3G9 751 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 TTF1Q15361 905 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 BMP2KLQ5H9B9 411 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 DCAF8Q5TAQ9 597 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 DBNDD1Q9H9R9 158 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 SUGT1Q9Y2Z0 365 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 RFX7Q2KHR2 1363 aa14.58□□□□□ -0.08
PDLIM5-220ENST00000514830 TSHZ3Q63HK5 1081 aa14.57□□□□□ -0.08
PDLIM5-220ENST00000514830 ZGPATQ8N5A5 531 aaKnown RBP14.57□□□□□ -0.08
PDLIM5-220ENST00000514830 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
PDLIM5-220ENST00000514830 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
PDLIM5-220ENST00000514830 USP17L3A6NCW0 530 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 USP17L4A6NCW7 530 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 KIF3CO14782 793 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 FRAT2O75474 233 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 CYP2E1P05181 493 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 VIL1P09327 827 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 GSPT1P15170 499 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 ZAP70P43403 619 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 RGS3P49796 1198 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 MMP14P50281 582 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 DACT2Q5SW24 774 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 TTLL5Q6EMB2 1281 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 USP17L1Q7RTZ2 530 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
PDLIM5-220ENST00000514830 TNIP1Q15025 636 aa14.55□□□□□ -0.08
PDLIM5-220ENST00000514830 SPTY2D1Q68D10 685 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-220ENST00000514830 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
PDLIM5-220ENST00000514830 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
PDLIM5-220ENST00000514830 IQSEC3Q9UPP2 1182 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-220ENST00000514830 MYH2Q9UKX2 1941 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 GTF2IP78347 998 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 CXCL9Q07325 125 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 CNTROBQ8N137 903 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 KBTBD3Q8NAB2 608 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 SNRKQ9NRH2 765 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 RNF181Q9P0P0 153 aa14.54□□□□□ -0.08
PDLIM5-220ENST00000514830 GOLIM4O00461 696 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 RPS12P25398 132 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 EIF6P56537 245 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 MFSD14BQ5SR56 506 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 C9orf131Q5VYM1 1079 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 CIAPIN1Q6FI81 312 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 AGBL3Q8NEM8 1001 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 GMLQ99445 158 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 DNAJC2Q99543 621 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 MRIQ9BWK5 157 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 ANTXR1Q9H6X2 564 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
PDLIM5-220ENST00000514830 MAST3O60307 1309 aa14.52□□□□□ -0.08
PDLIM5-220ENST00000514830 PSMD14O00487 310 aa14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 SDSP20132 328 aa14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 RSBN1LQ6PCB5 846 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 GPC2Q8N158 579 aa14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 CERS5Q8N5B7 392 aa14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 RBM46Q8TBY0 533 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 PIH1D3Q9NQM4 214 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 ECM29Q5VYK3 1845 aa14.52□□□□□ -0.09
PDLIM5-220ENST00000514830 SCN4AP35499 1836 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms