RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 KCNJ4P48050 445 aa13.09□□□□□ -0.31
DDR1-276ENST00000514534 CRHR2Q13324 411 aa13.09□□□□□ -0.31
DDR1-276ENST00000514534 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
DDR1-276ENST00000514534 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
DDR1-276ENST00000514534 CLMNQ96JQ2 1002 aa13.09□□□□□ -0.31
DDR1-276ENST00000514534 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
DDR1-276ENST00000514534 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
DDR1-276ENST00000514534 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
DDR1-276ENST00000514534 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
DDR1-276ENST00000514534 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
DDR1-276ENST00000514534 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
DDR1-276ENST00000514534 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
DDR1-276ENST00000514534 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
DDR1-276ENST00000514534 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
DDR1-276ENST00000514534 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
DDR1-276ENST00000514534 ITGA6P23229 1130 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 KLRK1P26718 216 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
DDR1-276ENST00000514534 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 VEZTQ9HBM0 779 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 OTOFQ9HC10 1997 aa13.06□□□□□ -0.32
DDR1-276ENST00000514534 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 H7C1W4 665 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 USP2O75604 605 aaPredicted RBP13.05□□□□□ -0.32
DDR1-276ENST00000514534 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 CHRNDQ07001 517 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
DDR1-276ENST00000514534 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
DDR1-276ENST00000514534 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 WDHD1O75717 1129 aaPredicted RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 GJA5P36382 358 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDR1-276ENST00000514534 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 ZNF804AQ7Z570 1209 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 PTPN18Q99952 460 aa13.04□□□□□ -0.32
DDR1-276ENST00000514534 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
DDR1-276ENST00000514534 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 IL1R1P14778 569 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 RASA3Q14644 834 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 TAF1CQ15572 869 aaPredicted RBP13.03□□□□□ -0.32
DDR1-276ENST00000514534 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 PTCH2Q9Y6C5 1203 aa13.03□□□□□ -0.32
DDR1-276ENST00000514534 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
DDR1-276ENST00000514534 APAF1O14727 1248 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 CSF1RP07333 972 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 GTF2A2P52657 109 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 KIF22Q14807 665 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
DDR1-276ENST00000514534 CCL15-CCL14A0A0B4J2E2 113 aa13.01□□□□□ -0.33
DDR1-276ENST00000514534 GCKRQ14397 625 aa13.01□□□□□ -0.33
DDR1-276ENST00000514534 CCL15Q16663 113 aa13.01□□□□□ -0.33
DDR1-276ENST00000514534 HTTP42858 3142 aa13□□□□□ -0.33
DDR1-276ENST00000514534 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
DDR1-276ENST00000514534 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
DDR1-276ENST00000514534 TAF5LO75529 589 aa13□□□□□ -0.33
DDR1-276ENST00000514534 GNRH1P01148 92 aa13□□□□□ -0.33
DDR1-276ENST00000514534 TNNI2P48788 182 aa13□□□□□ -0.33
DDR1-276ENST00000514534 PRMT2P55345 433 aa13□□□□□ -0.33
DDR1-276ENST00000514534 CAP1Q01518 475 aa13□□□□□ -0.33
DDR1-276ENST00000514534 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
DDR1-276ENST00000514534 TSPYL6Q8N831 410 aa13□□□□□ -0.33
DDR1-276ENST00000514534 CSADQ9Y600 493 aa13□□□□□ -0.33
DDR1-276ENST00000514534 MKI67P46013 3256 aaKnown RBP12.99□□□□□ -0.33
DDR1-276ENST00000514534 H0YGN5 161 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 CASP7P55210 303 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
DDR1-276ENST00000514534 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.99□□□□□ -0.33
DDR1-276ENST00000514534 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
DDR1-276ENST00000514534 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
DDR1-276ENST00000514534 SERPINA10Q9UK55 444 aa12.99□□□□□ -0.33
DDR1-276ENST00000514534 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 SNAP23O00161 211 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 VGLL4Q14135 290 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 HELBQ8NG08 1087 aaPredicted RBP12.98□□□□□ -0.33
DDR1-276ENST00000514534 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
DDR1-276ENST00000514534 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
DDR1-276ENST00000514534 CEP290O15078 2479 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms