RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 GPR101Q96P66 508 aaPredicted RBP23.79■■□□□ 1.4
SSBP2-218ENST00000514493 USP26Q9BXU7 913 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 DENND2AQ9ULE3 1009 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 DPEP1P16444 411 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 ZNF804AQ7Z570 1209 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 SYT17Q9BSW7 474 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 PIH1D3Q9NQM4 214 aaKnown RBP23.78■■□□□ 1.4
SSBP2-218ENST00000514493 IQSEC3Q9UPP2 1182 aaPredicted RBP23.78■■□□□ 1.4
SSBP2-218ENST00000514493 CHD4Q14839 1912 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 TGFB2P61812 414 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 DPP8Q6V1X1 898 aaPredicted RBP23.78■■□□□ 1.4
SSBP2-218ENST00000514493 C7orf43Q8WVR3 580 aa23.78■■□□□ 1.4
SSBP2-218ENST00000514493 ZFYP08048 801 aaPredicted RBP23.77■■□□□ 1.4
SSBP2-218ENST00000514493 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.77■■□□□ 1.48e-7■■■■■ 37.5
SSBP2-218ENST00000514493 ANO2Q9NQ90 1003 aa23.77■■□□□ 1.4
SSBP2-218ENST00000514493 C6orf229H3BNL8 230 aa23.76■■□□□ 1.39
SSBP2-218ENST00000514493 RNF113AO15541 343 aaKnown RBP23.76■■□□□ 1.39
SSBP2-218ENST00000514493 KCNA3P22001 575 aa23.76■■□□□ 1.39
SSBP2-218ENST00000514493 TTLL6Q8N841 843 aa23.76■■□□□ 1.39
SSBP2-218ENST00000514493 A0A0G2JLW4 131 aa23.75■■□□□ 1.39
SSBP2-218ENST00000514493 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
SSBP2-218ENST00000514493 CHGBP05060 677 aa23.75■■□□□ 1.39
SSBP2-218ENST00000514493 CC2D2BQ6DHV5 1058 aa23.75■■□□□ 1.39
SSBP2-218ENST00000514493 ZMYM1Q5SVZ6 1142 aa23.75■■□□□ 1.39
SSBP2-218ENST00000514493 ZSCAN25Q6NSZ9 544 aa23.75■■□□□ 1.39
SSBP2-218ENST00000514493 TDRD7Q8NHU6 1098 aaKnown RBP23.74■■□□□ 1.39
SSBP2-218ENST00000514493 WWC3Q9ULE0 1092 aa23.74■■□□□ 1.39
SSBP2-218ENST00000514493 FRAT2O75474 233 aaPredicted RBP23.73■■□□□ 1.39
SSBP2-218ENST00000514493 IDH1O75874 414 aaKnown RBP23.73■■□□□ 1.39
SSBP2-218ENST00000514493 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
SSBP2-218ENST00000514493 HELLSQ9NRZ9 838 aa23.73■■□□□ 1.39
SSBP2-218ENST00000514493 CD2APQ9Y5K6 639 aa23.73■■□□□ 1.39
SSBP2-218ENST00000514493 ADD2P35612 726 aa23.73■■□□□ 1.39
SSBP2-218ENST00000514493 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
SSBP2-218ENST00000514493 MCMDC2Q4G0Z9 681 aa23.73■■□□□ 1.39
SSBP2-218ENST00000514493 IL1R1P14778 569 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 KIAA1211Q6ZU35 1233 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
SSBP2-218ENST00000514493 APPBP2Q92624 585 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 EYA3Q99504 573 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 KIF2CQ99661 725 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 RTFDC1Q9BY42 306 aaPredicted RBP23.72■■□□□ 1.39
SSBP2-218ENST00000514493 CCDC171Q6TFL3 1326 aa23.72■■□□□ 1.39
SSBP2-218ENST00000514493 MAP3K12Q12852 859 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 BECN1Q14457 450 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 SLFNL1Q499Z3 407 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 CD209Q9NNX6 404 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 ZNF219Q9P2Y4 722 aaPredicted RBP23.71■■□□□ 1.39
SSBP2-218ENST00000514493 MAST3O60307 1309 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
SSBP2-218ENST00000514493 FER1L6Q2WGJ9 1857 aa23.7■■□□□ 1.39
SSBP2-218ENST00000514493 PDE6AP16499 860 aa23.7■■□□□ 1.39
SSBP2-218ENST00000514493 UBE3CQ15386 1083 aa23.7■■□□□ 1.39
SSBP2-218ENST00000514493 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.39
SSBP2-218ENST00000514493 SLC9C2Q5TAH2 1124 aa23.7■■□□□ 1.39
SSBP2-218ENST00000514493 SEC62Q99442 399 aaKnown RBP23.7■■□□□ 1.39
SSBP2-218ENST00000514493 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
SSBP2-218ENST00000514493 DAXXQ9UER7 740 aaPredicted RBP23.7■■□□□ 1.38
SSBP2-218ENST00000514493 UTRNP46939 3433 aa23.7■■□□□ 1.38
SSBP2-218ENST00000514493 SALL1Q9NSC2 1324 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 ZNF646O15015 1829 aaPredicted RBP23.69■■□□□ 1.38
SSBP2-218ENST00000514493 C21orf2O43822 256 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 CHAF1AQ13111 956 aaPredicted RBP23.69■■□□□ 1.38
SSBP2-218ENST00000514493 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 OSBP2Q969R2 916 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 ZC3H12CQ9C0D7 883 aaKnown RBP23.69■■□□□ 1.38
SSBP2-218ENST00000514493 COA1Q9GZY4 146 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 LRP2BPQ9P2M1 347 aa23.69■■□□□ 1.38
SSBP2-218ENST00000514493 TCRBV5S4A2TA0A5A2 114 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 MCCP23508 829 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 CCDC129Q6ZRS4 1044 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 ABCF2Q9UG63 623 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 PSME4Q14997 1843 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 ZNF532Q9HCE3 1301 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 M0R2C6 588 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 WDR66Q8TBY9 1149 aa23.68■■□□□ 1.38
SSBP2-218ENST00000514493 SCN9AQ15858 1988 aa23.67■■□□□ 1.38
SSBP2-218ENST00000514493 RIMBP2O15034 1052 aa23.67■■□□□ 1.38
SSBP2-218ENST00000514493 PTH1RQ03431 593 aa23.67■■□□□ 1.38
SSBP2-218ENST00000514493 MAGEB6Q8N7X4 407 aa23.67■■□□□ 1.38
SSBP2-218ENST00000514493 SOGA3Q5TF21 947 aa23.66■■□□□ 1.38
SSBP2-218ENST00000514493 ZGPATQ8N5A5 531 aaKnown RBP23.66■■□□□ 1.38
SSBP2-218ENST00000514493 SUPT20HQ8NEM7 779 aa23.66■■□□□ 1.38
SSBP2-218ENST00000514493 MYH2Q9UKX2 1941 aa23.66■■□□□ 1.38
SSBP2-218ENST00000514493 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 PUS7LQ9H0K6 701 aaKnown RBP23.65■■□□□ 1.38
SSBP2-218ENST00000514493 RAI14Q9P0K7 980 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 IGSF3O75054 1194 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 HSPA4P34932 840 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 DALRD3Q5D0E6 543 aaKnown RBP23.65■■□□□ 1.38
SSBP2-218ENST00000514493 MAP4K1Q92918 833 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 JAG2Q9Y219 1238 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 FAM205AQ6ZU69 1335 aa23.65■■□□□ 1.38
SSBP2-218ENST00000514493 RABEP1Q15276 862 aa23.64■■□□□ 1.37
SSBP2-218ENST00000514493 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.37
SSBP2-218ENST00000514493 PSMD1Q99460 953 aa23.64■■□□□ 1.37
SSBP2-218ENST00000514493 ANAPC15P60006 121 aa23.63■■□□□ 1.37
SSBP2-218ENST00000514493 SPTY2D1Q68D10 685 aaPredicted RBP23.63■■□□□ 1.37
SSBP2-218ENST00000514493 TMED8Q6PL24 325 aaPredicted RBP23.63■■□□□ 1.37
SSBP2-218ENST00000514493 TBC1D2Q9BYX2 928 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms