RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 IDH1O75874 414 aaKnown RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 SLC9C2Q5TAH2 1124 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 NIP7Q9Y221 180 aaKnown RBP eCLIP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 ELP1O95163 1332 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 MYH14Q7Z406 1995 aaKnown RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 PTPDC1A2A3K4 754 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 SNAP23O00161 211 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 LETM1O95202 739 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 NTSR2O95665 410 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 UQCRFS1P1P0C7P4 283 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 PDIA3P30101 505 aaKnown RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 CCT2P78371 535 aaKnown RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 RESTQ13127 1097 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 FAM184AQ8NB25 1140 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 SMARCC1Q92922 1105 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 MPHOSPH8Q99549 860 aa9.67□□□□□ -0.86
CPNE4-211ENST00000514439 NCOA5Q9HCD5 579 aaKnown RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 NAP1L2Q9ULW6 460 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-211ENST00000514439 H3BQV1 296 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 SLC5A1P13866 664 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 CLCN1P35523 988 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 CCDC152Q4G0S7 254 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 FBXL16Q8N461 479 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 ZNF274Q96GC6 653 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 SCAND2PQ9GZW5 306 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 SALL1Q9NSC2 1324 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 MYH7P12883 1935 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 PDE6AP16499 860 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 MB21D2Q8IYB1 491 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-211ENST00000514439 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 ZNF532Q9HCE3 1301 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 RTL9Q8NET4 1388 aa9.66□□□□□ -0.86
CPNE4-211ENST00000514439 ARAP2Q8WZ64 1704 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 ZNF213O14771 459 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 PRC1O43663 620 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 TOM1O60784 492 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 MCM5P33992 734 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 EVCP57679 992 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 ANTXR2P58335 489 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 RASGRF1Q13972 1273 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 SPATA5Q8NB90 893 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 NCOA7Q8NI08 942 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 LEO1Q8WVC0 666 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-211ENST00000514439 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
CPNE4-211ENST00000514439 DDX60Q8IY21 1712 aaKnown RBP9.65□□□□□ -0.86
CPNE4-211ENST00000514439 PPFIA3O75145 1194 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 IGHMBP2P38935 993 aaKnown RBP9.65□□□□□ -0.87
CPNE4-211ENST00000514439 FOSBP53539 338 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 NAA16Q6N069 864 aaPredicted RBP9.65□□□□□ -0.87
CPNE4-211ENST00000514439 GIMAP6Q6P9H5 292 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.87
CPNE4-211ENST00000514439 LINC00116Q8NCU8 138 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 NBPF3Q9H094 633 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.87
CPNE4-211ENST00000514439 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.87
CPNE4-211ENST00000514439 LIG1P18858 919 aa9.64□□□□□ -0.87
CPNE4-211ENST00000514439 FUCA2Q9BTY2 467 aa9.64□□□□□ -0.87
CPNE4-211ENST00000514439 COL5A3P25940 1745 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-211ENST00000514439 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
CPNE4-211ENST00000514439 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
CPNE4-211ENST00000514439 LAMB2P55268 1798 aa9.64□□□□□ -0.87
CPNE4-211ENST00000514439 MYO5AQ9Y4I1 1855 aaKnown RBP9.63□□□□□ -0.87
CPNE4-211ENST00000514439 BCORQ6W2J9 1755 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 WDR19Q8NEZ3 1342 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 KLF18A0A0U1RQI7 1052 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 GOLGA6L4A6NEF3 574 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 GOLGA8BA8MQT2 603 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 APPP05067 770 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 BCAMP50895 628 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 KCNQ4P56696 695 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 CHRNDQ07001 517 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 VPS72Q15906 364 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 ZSCAN30Q86W11 494 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 DENND2AQ9ULE3 1009 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 BCL9LQ86UU0 1499 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 COL4A1P02462 1669 aa9.63□□□□□ -0.87
CPNE4-211ENST00000514439 FDPSP14324 419 aaKnown RBP9.62□□□□□ -0.87
CPNE4-211ENST00000514439 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 STRBPQ96SI9 672 aaKnown RBP9.62□□□□□ -0.87
CPNE4-211ENST00000514439 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 MBD4O95243 580 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
CPNE4-211ENST00000514439 GUCY1B3Q02153 619 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms