RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 HMMRO75330 724 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 TIMM10P62072 90 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 TFCP2Q12800 502 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 OS9Q13438 667 aaPredicted RBP10.26□□□□□ -0.77
CCL28-204ENST00000514421 ATP2B3Q16720 1220 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 LDHDQ86WU2 507 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 LRRC37AA6NMS7 1700 aa10.26□□□□□ -0.77
CCL28-204ENST00000514421 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
CCL28-204ENST00000514421 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 FKBP1AP62942 108 aaKnown RBP10.25□□□□□ -0.77
CCL28-204ENST00000514421 HSP90AB4PQ58FF6 505 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
CCL28-204ENST00000514421 OGFOD1Q8N543 542 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
CCL28-204ENST00000514421 NEUROD6Q96NK8 337 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 GPR108Q9NPR9 543 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 GNL3LQ9NVN8 582 aaKnown RBP10.25□□□□□ -0.77
CCL28-204ENST00000514421 PGAP2Q9UHJ9 254 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 FAM205AQ6ZU69 1335 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 MYO3BQ8WXR4 1341 aa10.25□□□□□ -0.77
CCL28-204ENST00000514421 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 IGHDP01880 384 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 HIRAP54198 1017 aaPredicted RBP10.24□□□□□ -0.77
CCL28-204ENST00000514421 ZNF280AP59817 542 aaPredicted RBP10.24□□□□□ -0.77
CCL28-204ENST00000514421 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
CCL28-204ENST00000514421 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 SIRT2Q8IXJ6 389 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 MXD3Q9BW11 206 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 HDAC9Q9UKV0 1011 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
CCL28-204ENST00000514421 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 ZBTB22O15209 634 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
CCL28-204ENST00000514421 ERC1Q8IUD2 1116 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 TBC1D22AQ8WUA7 517 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
CCL28-204ENST00000514421 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 WDR90Q96KV7 1748 aa10.23□□□□□ -0.77
CCL28-204ENST00000514421 SEMA3EO15041 775 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
CCL28-204ENST00000514421 ADORA1P30542 326 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 CHAF1AQ13111 956 aaPredicted RBP10.22□□□□□ -0.77
CCL28-204ENST00000514421 SCARF1Q14162 830 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 MFSD14BQ5SR56 506 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 MAP1SQ66K74 1059 aaPredicted RBP10.22□□□□□ -0.77
CCL28-204ENST00000514421 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 KIAA0825Q8IV33 1275 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 WDR66Q8TBY9 1149 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 TRPM4Q8TD43 1214 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 MYOZ2Q9NPC6 264 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 JAG2Q9Y219 1238 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 EXOC6BQ9Y2D4 811 aa10.22□□□□□ -0.77
CCL28-204ENST00000514421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.22□□□□□ -0.77
CCL28-204ENST00000514421 HSPA6P17066 643 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 PHKA1P46020 1223 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 KIF4BQ2VIQ3 1234 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 TNNI3KQ59H18 835 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 CCDC158Q5M9N0 1113 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 CDC37L1Q7L3B6 337 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 MRIQ9BWK5 157 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.77
CCL28-204ENST00000514421 DENND2AQ9ULE3 1009 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 FPGT-TNNI3KV9GXZ4 949 aa10.21□□□□□ -0.77
CCL28-204ENST00000514421 F8W031 263 aaPredicted RBP10.2□□□□□ -0.78
CCL28-204ENST00000514421 ZNF609O15014 1411 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 EGFRP00533 1210 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 UQCRFS1P1P0C7P4 283 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 APLP1P51693 650 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 DLGAP5Q15398 846 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 RHPN1Q8TCX5 695 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 DCPSQ96C86 337 aaKnown RBP10.2□□□□□ -0.78
CCL28-204ENST00000514421 EAF2Q96CJ1 260 aaPredicted RBP10.2□□□□□ -0.78
CCL28-204ENST00000514421 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 BACH2Q9BYV9 841 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 DCTPP1Q9H773 170 aa10.2□□□□□ -0.78
CCL28-204ENST00000514421 TTF2Q9UNY4 1162 aaKnown RBP10.2□□□□□ -0.78
CCL28-204ENST00000514421 SCN4AP35499 1836 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 TIAM2Q8IVF5 1701 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 WNT10BO00744 389 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
CCL28-204ENST00000514421 NBPF9Q3BBW0 867 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 USP48Q86UV5 1035 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 CLASRPQ8N2M8 674 aaKnown RBP10.19□□□□□ -0.78
CCL28-204ENST00000514421 ZBED3Q96IU2 234 aaPredicted RBP10.19□□□□□ -0.78
CCL28-204ENST00000514421 DBNDD2Q9BQY9 259 aa10.19□□□□□ -0.78
CCL28-204ENST00000514421 CCDC8Q9H0W5 538 aaPredicted RBP10.19□□□□□ -0.78
CCL28-204ENST00000514421 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms