RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 U2AF1Q01081 240 aaKnown RBP eCLIP8.12□□□□□ -1.11
AFP-206ENST00000514279 ERICH6BQ5W0A0 696 aa8.12□□□□□ -1.11
AFP-206ENST00000514279 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
AFP-206ENST00000514279 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
AFP-206ENST00000514279 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
AFP-206ENST00000514279 KDRP35968 1356 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 SBF2Q86WG5 1849 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 SIK1P57059 783 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 MTHFSDQ2M296 383 aaKnown RBP8.11□□□□□ -1.11
AFP-206ENST00000514279 RIPOR1Q6ZS17 1223 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 PROCA1Q8NCQ7 364 aaPredicted RBP8.11□□□□□ -1.11
AFP-206ENST00000514279 NEDD1Q8NHV4 660 aa8.11□□□□□ -1.11
AFP-206ENST00000514279 TNS1Q9HBL0 1735 aaKnown RBP8.11□□□□□ -1.11
AFP-206ENST00000514279 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 POLD1P28340 1107 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 FOXR1Q6PIV2 292 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 PNMA1Q8ND90 353 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 RTF1Q92541 710 aaKnown RBP8.1□□□□□ -1.11
AFP-206ENST00000514279 MTFR1LQ9H019 292 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
AFP-206ENST00000514279 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
AFP-206ENST00000514279 NHSQ6T4R5 1651 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 KRBA1A5PL33 1030 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 GNAT3A8MTJ3 354 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 RNMTO43148 476 aaKnown RBP8.09□□□□□ -1.11
AFP-206ENST00000514279 ZBTB7AO95365 584 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
AFP-206ENST00000514279 KCNQ4P56696 695 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 TEFQ10587 303 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
AFP-206ENST00000514279 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
AFP-206ENST00000514279 ESPNB1AK53 854 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 MEN1O00255 615 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 HTATSF1O43719 755 aaKnown RBP8.08□□□□□ -1.12
AFP-206ENST00000514279 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 DBN1Q16643 649 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 ZNF827Q17R98 1081 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
AFP-206ENST00000514279 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
AFP-206ENST00000514279 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
AFP-206ENST00000514279 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
AFP-206ENST00000514279 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 BCRP11274 1271 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 TRAPPC3LQ5T215 181 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 PPP2R2DQ66LE6 453 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 GMCL1Q96IK5 515 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 ARXQ96QS3 562 aa8.07□□□□□ -1.12
AFP-206ENST00000514279 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
AFP-206ENST00000514279 RTCBQ9Y3I0 505 aaKnown RBP8.07□□□□□ -1.12
AFP-206ENST00000514279 PNPLA7Q6ZV29 1317 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 MYBBP1AQ9BQG0 1328 aaKnown RBP8.06□□□□□ -1.12
AFP-206ENST00000514279 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
AFP-206ENST00000514279 USP17L8P0C7I0 530 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 SSFA2P28290 1259 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 COL23A1Q86Y22 540 aaPredicted RBP8.06□□□□□ -1.12
AFP-206ENST00000514279 TTC5Q8N0Z6 440 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 ACDQ96AP0 544 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 TEX13AQ9BXU3 409 aaPredicted RBP8.06□□□□□ -1.12
AFP-206ENST00000514279 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
AFP-206ENST00000514279 BTAF1O14981 1849 aa8.06□□□□□ -1.12
AFP-206ENST00000514279 RREB1Q92766 1687 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 RPS6KA4O75676 772 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 IL17REQ8NFR9 667 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 PHACTR3Q96KR7 559 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 TRERF1Q96PN7 1200 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 NUP188Q5SRE5 1749 aa8.05□□□□□ -1.12
AFP-206ENST00000514279 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 EP400Q96L91 3159 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 PKD1L3Q7Z443 1732 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 H7C1W4 665 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 STARD3NLO95772 234 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 RFC4P35249 363 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 POU4F2Q12837 409 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 ITPK1Q13572 414 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 WDR43Q15061 677 aaKnown RBP eCLIP8.04□□□□□ -1.12
AFP-206ENST00000514279 NPM2Q86SE8 214 aaKnown RBP8.04□□□□□ -1.12
AFP-206ENST00000514279 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 LINC00116Q8NCU8 138 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 PNISRQ8TF01 805 aaKnown RBP8.04□□□□□ -1.12
AFP-206ENST00000514279 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 MAP3K5Q99683 1374 aa8.04□□□□□ -1.12
AFP-206ENST00000514279 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 KDM6AO15550 1401 aaPredicted RBP8.03□□□□□ -1.12
AFP-206ENST00000514279 A0A1W2PRU2 124 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 MX2P20592 715 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 SLC39A6Q13433 755 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 TAF7Q15545 349 aaPredicted RBP8.03□□□□□ -1.12
AFP-206ENST00000514279 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
AFP-206ENST00000514279 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 PRKRIP1Q9H875 184 aaPredicted RBP8.03□□□□□ -1.12
AFP-206ENST00000514279 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
AFP-206ENST00000514279 SHANK3Q9BYB0 1731 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms