RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	MRPL42	Q9Y6G3	142 aa	Known RBP	7.29	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	PDE2A	O00408	941 aa	Predicted RBP	7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	CLSTN1	O94985	981 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	CD33	P20138	364 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	RAB33A	Q14088	237 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	FAM196A	Q6ZSG2	479 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	HNRNPLL	Q8WVV9	542 aa	Known RBP	7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	ABHD17A	Q96GS6	310 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	HHIP	Q96QV1	700 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	SRPK1	Q96SB4	655 aa	Known RBP	7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	ZNF576	Q9H609	170 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	NDFIP2	Q9NV92	336 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	ROBO2	Q9HCK4	1378 aa		7.28	□□□□□ -1.24
CALCOCO2-222	ENST00000514006	LOC102724428	A0A0B4J2F2	783 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	NFKBIE	O00221	500 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	AXIN1	O15169	862 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	KLF4	O43474	513 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CRK	P46108	304 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SIK1	P57059	783 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	GPLD1	P80108	840 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PTS	Q03393	145 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TCEAL1	Q15170	157 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SLITRK4	Q8IW52	837 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TRIM42	Q8IWZ5	723 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TRIM22	Q8IYM9	498 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TMEM39A	Q9NV64	488 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PRKAG3	Q9UGI9	489 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SAMM50	Q9Y512	469 aa		7.27	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SLC35F4	A4IF30	521 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PAGE1	O75459	146 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	GHRH	P01286	108 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	HSD3B2	P26439	372 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	MLLT1	Q03111	559 aa	Predicted RBP	7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PPP2R3A	Q06190	1150 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FAAP100	Q0VG06	881 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	DBN1	Q16643	649 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PKDCC	Q504Y2	493 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SEZ6	Q53EL9	994 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	DIEXF	Q68CQ4	756 aa	Known RBP	7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CCDC81	Q6ZN84	652 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CCDC84	Q86UT8	332 aa	Predicted RBP	7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PBX4	Q9BYU1	374 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	RBSN	Q9H1K0	784 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	MIR1-1HG	Q9H1L0	117 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	RASSF4	Q9H2L5	321 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	HCN2	Q9UL51	889 aa		7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.26	□□□□□ -1.25
CALCOCO2-222	ENST00000514006		J3QW42	95 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TLR3	O15455	904 aa	Known RBP	7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	F13A1	P00488	732 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ATP11A	P98196	1134 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PCSK7	Q16549	785 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TNNI3K	Q59H18	835 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	HFE2	Q6ZVN8	426 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TRPM4	Q8TD43	1214 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	GMCL1	Q96IK5	515 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	LRRC3	Q9BY71	257 aa		7.25	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SOBP	A7XYQ1	873 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SMAD7	O15105	426 aa	Known RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	DGAT1	O75907	488 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	MCM4	P33991	863 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ZNF157	P51786	506 aa	Predicted RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	EIF6	P56537	245 aa	Known RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CWF19L2	Q2TBE0	894 aa	Known RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FAM182B	Q5T319	152 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CRIPAK	Q8N1N5	446 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	GATAD2B	Q8WXI9	593 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	JARID2	Q92833	1246 aa	Predicted RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SHD	Q96IW2	340 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	DEPDC7	Q96QD5	511 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	MUC3B	Q9H195	1237 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	IGFLR1	Q9H665	355 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	SNTG2	Q9NY99	539 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PPT2	Q9UMR5	302 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PHF24	Q9UPV7	400 aa		7.24	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ZBTB42	B2RXF5	422 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FGFR3	P22607	806 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ZNF165	P49910	485 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	TBC1D8B	Q0IIM8	1120 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	MPP2	Q14168	576 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FBXW10	Q5XX13	1052 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	LRP10	Q7Z4F1	713 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CCDC155	Q8N6L0	562 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FBXO27	Q8NI29	283 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	BSND	Q8WZ55	320 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ZNF837	Q96EG3	531 aa	Predicted RBP	7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	FERD3L	Q96RJ6	166 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CRBN	Q96SW2	442 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	UBE2O	Q9C0C9	1292 aa	Known RBP	7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PRR12	Q9ULL5	1215 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PCDHB5	Q9Y5E4	795 aa		7.23	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	CCDC85C	A6NKD9	419 aa		7.22	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	ENPP3	O14638	875 aa		7.22	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	EIF2AK2	P19525	551 aa	Known RBP	7.22	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	NME2	P22392	152 aa		7.22	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	PCDH1	Q08174	1060 aa		7.22	□□□□□ -1.25
CALCOCO2-222	ENST00000514006	RASA3	Q14644	834 aa		7.22	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms