RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
HTT-213ENST00000513806 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
HTT-213ENST00000513806 PDE4AP27815 886 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 MCAMP43121 646 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 NUCB1Q02818 461 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 RASGRF1Q13972 1273 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 CERS5Q8N5B7 392 aa13.9□□□□□ -0.18
HTT-213ENST00000513806 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
HTT-213ENST00000513806 DACT2Q5SW24 774 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 TTLL5Q6EMB2 1281 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
HTT-213ENST00000513806 HMG20BQ9P0W2 317 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 MYH7P12883 1935 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
HTT-213ENST00000513806 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 DOCK2Q92608 1830 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
HTT-213ENST00000513806 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
HTT-213ENST00000513806 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
HTT-213ENST00000513806 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
HTT-213ENST00000513806 SALL3Q9BXA9 1300 aa13.88□□□□□ -0.19
HTT-213ENST00000513806 ZAP70P43403 619 aa13.87□□□□□ -0.19
HTT-213ENST00000513806 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
HTT-213ENST00000513806 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
HTT-213ENST00000513806 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
HTT-213ENST00000513806 POLR2AP24928 1970 aaKnown RBP13.87□□□□□ -0.19
HTT-213ENST00000513806 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
HTT-213ENST00000513806 GLTPD2A6NH11 291 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 VIL1P09327 827 aaKnown RBP13.86□□□□□ -0.19
HTT-213ENST00000513806 MFSD14BQ5SR56 506 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
HTT-213ENST00000513806 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
HTT-213ENST00000513806 KIAA0825Q8IV33 1275 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
HTT-213ENST00000513806 GNL3LQ9NVN8 582 aaKnown RBP13.86□□□□□ -0.19
HTT-213ENST00000513806 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
HTT-213ENST00000513806 SCN4AP35499 1836 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 POTECB2RU33 542 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
HTT-213ENST00000513806 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 MX1P20591 662 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 YY1P25490 414 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 EPS15P42566 896 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 SCNN1DP51172 638 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 TNIP1Q15025 636 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 GPC2Q8N158 579 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 NMRK2Q9NPI5 230 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
HTT-213ENST00000513806 ECHDC1Q9NTX5 307 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 DENND2AQ9ULE3 1009 aa13.85□□□□□ -0.19
HTT-213ENST00000513806 MAST2Q6P0Q8 1798 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 EGFRP00533 1210 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 CHGBP05060 677 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 PRDX5P30044 214 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 PDE1AP54750 535 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 GMLQ99445 158 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 RRAGCQ9HB90 399 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 ABCF2Q9UG63 623 aa13.84□□□□□ -0.19
HTT-213ENST00000513806 ZC3H4Q9UPT8 1303 aaKnown RBP13.84□□□□□ -0.19
HTT-213ENST00000513806 GOLIM4O00461 696 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 ATP5JP18859 108 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
HTT-213ENST00000513806 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 CNOT7Q9UIV1 285 aaKnown RBP13.83□□□□□ -0.2
HTT-213ENST00000513806 AOX1Q06278 1338 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 ECM29Q5VYK3 1845 aa13.83□□□□□ -0.2
HTT-213ENST00000513806 SEMA3EO15041 775 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 RGS3P49796 1198 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 WDR66Q8TBY9 1149 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 TRPM4Q8TD43 1214 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 ZNF512BQ96KM6 892 aaPredicted RBP13.82□□□□□ -0.2
HTT-213ENST00000513806 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
HTT-213ENST00000513806 TTF2Q9UNY4 1162 aaKnown RBP13.82□□□□□ -0.2
HTT-213ENST00000513806 CDK5RAP2Q96SN8 1893 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 DIXDC1Q155Q3 683 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 TBC1D10BQ4KMP7 808 aaPredicted RBP13.81□□□□□ -0.2
HTT-213ENST00000513806 ZNF384Q8TF68 577 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 GPATCH3Q96I76 525 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 HAUS7Q99871 368 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
HTT-213ENST00000513806 SCAF8Q9UPN6 1271 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms