RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
NFKB1-211ENST00000513803 OPTNQ96CV9 577 aa14.06□□□□□ -0.16
NFKB1-211ENST00000513803 MYD88Q99836 296 aa14.06□□□□□ -0.16
NFKB1-211ENST00000513803 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
NFKB1-211ENST00000513803 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-211ENST00000513803 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
NFKB1-211ENST00000513803 CCL15-CCL14A0A0B4J2E2 113 aa14.05□□□□□ -0.16
NFKB1-211ENST00000513803 CCL15Q16663 113 aa14.05□□□□□ -0.16
NFKB1-211ENST00000513803 BRI3BPQ8WY22 251 aa14.05□□□□□ -0.16
NFKB1-211ENST00000513803 JARID2Q92833 1246 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-211ENST00000513803 LAS1LQ9Y4W2 734 aaKnown RBP14.05□□□□□ -0.16
NFKB1-211ENST00000513803 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
NFKB1-211ENST00000513803 CCER1Q8TC90 406 aaPredicted RBP14.04□□□□□ -0.16
NFKB1-211ENST00000513803 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
NFKB1-211ENST00000513803 VEZTQ9HBM0 779 aa14.04□□□□□ -0.16
NFKB1-211ENST00000513803 CLRN2A0PK11 232 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 TLR2O60603 784 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 CTSWP56202 376 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 LACTBP83111 547 aaPredicted RBP14.03□□□□□ -0.16
NFKB1-211ENST00000513803 RASA3Q14644 834 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 CFAP100Q494V2 611 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 PRMT6Q96LA8 375 aaPredicted RBP14.03□□□□□ -0.16
NFKB1-211ENST00000513803 SSC5DA1L4H1 1573 aa14.03□□□□□ -0.16
NFKB1-211ENST00000513803 ZBTB7BO15156 539 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-211ENST00000513803 GJB1P08034 283 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 HOXD10P28358 340 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
NFKB1-211ENST00000513803 GJA8P48165 433 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 TNFAIP1Q13829 316 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 MTFR1Q15390 333 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 HELBQ8NG08 1087 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-211ENST00000513803 ARHGAP39Q9C0H5 1083 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 GREM2Q9H772 168 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 CD209Q9NNX6 404 aa14.02□□□□□ -0.17
NFKB1-211ENST00000513803 KCNJ4P48050 445 aa14.01□□□□□ -0.17
NFKB1-211ENST00000513803 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
NFKB1-211ENST00000513803 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
NFKB1-211ENST00000513803 UBE2Q1Q7Z7E8 422 aa14.01□□□□□ -0.17
NFKB1-211ENST00000513803 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
NFKB1-211ENST00000513803 CSADQ9Y600 493 aa14.01□□□□□ -0.17
NFKB1-211ENST00000513803 LAMA3Q16787 3333 aa14.01□□□□□ -0.17
NFKB1-211ENST00000513803 F8W031 263 aaPredicted RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 SOX1O00570 391 aaPredicted RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 DDX58O95786 925 aaKnown RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 CETPP11597 493 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 NEUROD2Q15784 382 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 GPR153Q6NV75 609 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 CERS5Q8N5B7 392 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 RAET1EQ8TD07 263 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 LRCH3Q96II8 777 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 METTL22Q9BUU2 404 aaPredicted RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 RNF208Q9H0X6 261 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
NFKB1-211ENST00000513803 PCDHAC2Q9Y5I4 1007 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 LAMB1P07942 1786 aa14□□□□□ -0.17
NFKB1-211ENST00000513803 EVI5O60447 810 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 CCL5P13501 91 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 KLRK1P26718 216 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 GRK4P32298 578 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 TRIM47Q96LD4 638 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 SRRDQ9UH36 339 aa13.99□□□□□ -0.17
NFKB1-211ENST00000513803 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
NFKB1-211ENST00000513803 CAPN2P17655 700 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 PSMC4P43686 418 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 FKBP1AP62942 108 aaKnown RBP13.98□□□□□ -0.17
NFKB1-211ENST00000513803 UBXN2AP68543 259 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 VGLL4Q14135 290 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
NFKB1-211ENST00000513803 SNAPC2Q13487 334 aa13.97□□□□□ -0.17
NFKB1-211ENST00000513803 DEFB123Q8N688 67 aa13.97□□□□□ -0.17
NFKB1-211ENST00000513803 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
NFKB1-211ENST00000513803 STXBP5LQ9Y2K9 1186 aa13.97□□□□□ -0.17
NFKB1-211ENST00000513803 BTBD19C9JJ37 291 aa13.96□□□□□ -0.17
NFKB1-211ENST00000513803 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 TNNI2P48788 182 aa13.96□□□□□ -0.17
NFKB1-211ENST00000513803 C17orf99Q6UX52 265 aa13.96□□□□□ -0.17
NFKB1-211ENST00000513803 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 ZNF804AQ7Z570 1209 aa13.96□□□□□ -0.17
NFKB1-211ENST00000513803 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
NFKB1-211ENST00000513803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 U2AF1L4Q8WU68 220 aaKnown RBP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 ZNF70Q9UC06 446 aaPredicted RBP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 ZNF646O15015 1829 aaPredicted RBP13.96□□□□□ -0.17
NFKB1-211ENST00000513803 SPDYE5A6NIY4 337 aa13.95□□□□□ -0.18
NFKB1-211ENST00000513803 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
NFKB1-211ENST00000513803 IL1R1P14778 569 aa13.95□□□□□ -0.18
NFKB1-211ENST00000513803 OSBPP22059 807 aa13.95□□□□□ -0.18
NFKB1-211ENST00000513803 CHRNDQ07001 517 aa13.95□□□□□ -0.18
NFKB1-211ENST00000513803 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms