RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 MAP3K13O43283 966 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
CAST-239ENST00000513666 CRHR2Q13324 411 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 ZNF333Q96JL9 665 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 CLMNQ96JQ2 1002 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 SPEF2Q9C093 1822 aa11.66□□□□□ -0.54
CAST-239ENST00000513666 CAP1Q01518 475 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 SP3Q02447 781 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 CDC5LQ99459 802 aaKnown RBP11.65□□□□□ -0.54
CAST-239ENST00000513666 DEFB129Q9H1M3 183 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
CAST-239ENST00000513666 MINPP1Q9UNW1 487 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
CAST-239ENST00000513666 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.54
CAST-239ENST00000513666 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.55
CAST-239ENST00000513666 CCT4P50991 539 aaKnown RBP11.65□□□□□ -0.55
CAST-239ENST00000513666 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.55
CAST-239ENST00000513666 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.55
CAST-239ENST00000513666 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.55
CAST-239ENST00000513666 OTUD5Q96G74 571 aa11.65□□□□□ -0.55
CAST-239ENST00000513666 MYD88Q99836 296 aa11.65□□□□□ -0.55
CAST-239ENST00000513666 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.55
CAST-239ENST00000513666 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
CAST-239ENST00000513666 PPP2R3BQ9Y5P8 575 aa11.65□□□□□ -0.55
CAST-239ENST00000513666 BRCA2P51587 3418 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
CAST-239ENST00000513666 H0YGN5 161 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 GJA5P36382 358 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 CTSWP56202 376 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
CAST-239ENST00000513666 MYH3P11055 1940 aa11.63□□□□□ -0.55
CAST-239ENST00000513666 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
CAST-239ENST00000513666 PTPN18Q99952 460 aa11.63□□□□□ -0.55
CAST-239ENST00000513666 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
CAST-239ENST00000513666 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
CAST-239ENST00000513666 LEMD3Q9Y2U8 911 aa11.63□□□□□ -0.55
CAST-239ENST00000513666 ARHGEF6Q15052 776 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 SLC4A8Q2Y0W8 1093 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 SLC9C1Q4G0N8 1177 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 PTCH2Q9Y6C5 1203 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 ZNF804BA4D1E1 1349 aa11.62□□□□□ -0.55
CAST-239ENST00000513666 IREB2P48200 963 aaKnown RBP11.61□□□□□ -0.55
CAST-239ENST00000513666 GTF2IP78347 998 aa11.61□□□□□ -0.55
CAST-239ENST00000513666 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
CAST-239ENST00000513666 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
CAST-239ENST00000513666 SZT2Q5T011 3432 aa11.61□□□□□ -0.55
CAST-239ENST00000513666 USP2O75604 605 aaPredicted RBP11.6□□□□□ -0.55
CAST-239ENST00000513666 KLRK1P26718 216 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 ANKRD13AQ8IZ07 590 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 GREM2Q9H772 168 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 DLL1O00548 723 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 TIE1P35590 1138 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 NBPF12Q5TAG4 269 aaPredicted RBP11.6□□□□□ -0.55
CAST-239ENST00000513666 CCDC146Q8IYE0 955 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
CAST-239ENST00000513666 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 MYO1BO43795 1136 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 IGHMBP2P38935 993 aaKnown RBP11.59□□□□□ -0.55
CAST-239ENST00000513666 CERS5Q8N5B7 392 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 OPTNQ96CV9 577 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 ANKRD2Q9GZV1 360 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 ZFYVE28Q9HCC9 887 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
CAST-239ENST00000513666 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
CAST-239ENST00000513666 DDX58O95786 925 aaKnown RBP11.58□□□□□ -0.56
CAST-239ENST00000513666 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
CAST-239ENST00000513666 CFAP100Q494V2 611 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 SLC17A8Q8NDX2 589 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 BRI3BPQ8WY22 251 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
CAST-239ENST00000513666 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
CAST-239ENST00000513666 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
CAST-239ENST00000513666 IGKV5-2P06315 115 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
CAST-239ENST00000513666 RASA3Q14644 834 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 SLC39A7Q92504 469 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
CAST-239ENST00000513666 MAP3K2Q9Y2U5 619 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 AOX1Q06278 1338 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 ZSWIM8A7E2V4 1837 aa11.57□□□□□ -0.56
CAST-239ENST00000513666 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms