RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 MB21D2Q8IYB1 491 aaPredicted RBP10.93□□□□□ -0.66
PROM1-215ENST00000513448 DDX11Q96FC9 970 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 PUS7LQ9H0K6 701 aaKnown RBP10.93□□□□□ -0.66
PROM1-215ENST00000513448 GOLGA6L6A8MZA4 724 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 FOXP2O15409 715 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 GPTP24298 496 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 ADD1P35611 737 aaKnown RBP10.92□□□□□ -0.66
PROM1-215ENST00000513448 EIF5P55010 431 aaKnown RBP10.92□□□□□ -0.66
PROM1-215ENST00000513448 TYRO3Q06418 890 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 KIAA2012Q0VF49 1180 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 SCARF1Q14162 830 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 PGBD1Q96JS3 809 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 LRP5O75197 1615 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 FGFR2P21802 821 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 ALX1Q15699 326 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 CARMIL3Q8ND23 1372 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 RTL9Q8NET4 1388 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
PROM1-215ENST00000513448 CICQ96RK0 1608 aaPredicted RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 PRC1O43663 620 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 CCT2P78371 535 aaKnown RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 SLC9C2Q5TAH2 1124 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 CCDC102BQ68D86 513 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 TTLL5Q6EMB2 1281 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 SASS6Q6UVJ0 657 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 BRAPQ7Z569 592 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 CCDC85AQ96PX6 553 aaPredicted RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 MRVI1Q9Y6F6 885 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 COL16A1Q07092 1604 aaPredicted RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 DTNBO60941 627 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 SLC5A1P13866 664 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
PROM1-215ENST00000513448 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
PROM1-215ENST00000513448 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.9□□□□□ -0.66
PROM1-215ENST00000513448 MYH15Q9Y2K3 1946 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 RGL2O15211 777 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 NR1I2O75469 434 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 CDKL5O76039 1030 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 FDPSP14324 419 aaKnown RBP10.9□□□□□ -0.66
PROM1-215ENST00000513448 SYNE4Q8N205 404 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 FBXO18Q8NFZ0 1043 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.66
PROM1-215ENST00000513448 TMEM87BQ96K49 555 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
PROM1-215ENST00000513448 RTEL1Q9NZ71 1219 aa10.9□□□□□ -0.66
PROM1-215ENST00000513448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
PROM1-215ENST00000513448 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 KLF18A0A0U1RQI7 1052 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 CPLX1O14810 134 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 MAP3K12Q12852 859 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 DDB1Q16531 1140 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 CAMK4Q16566 473 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 CCDC152Q4G0S7 254 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 CCDC73Q6ZRK6 1079 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 DDX60Q8IY21 1712 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 ROBO1Q9Y6N7 1651 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 TCRBV5S4A2TA0A5A2 114 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 YEATS4O95619 227 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 PDE6AP16499 860 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 GNAT2P19087 354 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 FAM160A1Q05DH4 1040 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 ADALQ6DHV7 355 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 INTS5Q6P9B9 1019 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 CHST3Q7LGC8 479 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 TDRD7Q8NHU6 1098 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 KCNG4Q8TDN1 519 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 SMARCC1Q92922 1105 aaPredicted RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 MPHOSPH8Q99549 860 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 NCOA5Q9HCD5 579 aaKnown RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
PROM1-215ENST00000513448 NAP1L2Q9ULW6 460 aaPredicted RBP10.89□□□□□ -0.67
PROM1-215ENST00000513448 RREB1Q92766 1687 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 ZNF532Q9HCE3 1301 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 GOLGA8BA8MQT2 603 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
PROM1-215ENST00000513448 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
PROM1-215ENST00000513448 ANTXR2P58335 489 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 HAND2P61296 217 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 ANO6Q4KMQ2 910 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 PI16Q6UXB8 463 aa10.88□□□□□ -0.67
PROM1-215ENST00000513448 CCAR1Q8IX12 1150 aaKnown RBP10.88□□□□□ -0.67
PROM1-215ENST00000513448 SPATA5Q8NB90 893 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms