RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 CEP41Q9BYV8 373 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 KCNF1Q9H3M0 494 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 SALL4Q9UJQ4 1053 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.23□□□□□ -1.73
SMN1-208ENST00000513228 F8W735 103 aaPredicted RBP4.22□□□□□ -1.73
SMN1-208ENST00000513228 GAS2O43903 313 aaKnown RBP4.22□□□□□ -1.73
SMN1-208ENST00000513228 GADD45BO75293 160 aaPredicted RBP4.22□□□□□ -1.73
SMN1-208ENST00000513228 RXRBP28702 533 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 PIP4K2BP78356 416 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 C19orf57Q0VDD7 668 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 UBASH3BQ8TF42 649 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 BSNDQ8WZ55 320 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 KLHDC7BQ96G42 594 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 MEGF10Q96KG7 1140 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 ZKSCAN3Q9BRR0 538 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 RUSC1Q9BVN2 902 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 LATS2Q9NRM7 1088 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 DZANK1Q9NVP4 752 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 EGFL7Q9UHF1 273 aa4.22□□□□□ -1.73
SMN1-208ENST00000513228 DHX15O43143 795 aaKnown RBP4.21□□□□□ -1.74
SMN1-208ENST00000513228 WISP1O95388 367 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 GSTM4Q03013 218 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 UTP4Q969X6 686 aaKnown RBP4.21□□□□□ -1.74
SMN1-208ENST00000513228 EHD4Q9H223 541 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 CHRDQ9H2X0 955 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 ZFYVE28Q9HCC9 887 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 KCNK4Q9NYG8 393 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 STOML1Q9UBI4 398 aa4.21□□□□□ -1.74
SMN1-208ENST00000513228 METTL12A8MUP2 240 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 H2AFB1P0C5Y9 115 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 H2AFB2P0C5Z0 115 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 NPR3P17342 541 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 MAPK1P28482 360 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 NUTM2GQ5VZR2 741 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 GJD3Q8N144 294 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 TMEM102Q8N9M5 508 aaPredicted RBP4.2□□□□□ -1.74
SMN1-208ENST00000513228 C12orf50Q8NA57 414 aaPredicted RBP4.2□□□□□ -1.74
SMN1-208ENST00000513228 DDX54Q8TDD1 881 aaKnown RBP4.2□□□□□ -1.74
SMN1-208ENST00000513228 NXPE3Q969Y0 559 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 NIF3L1Q9GZT8 377 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 LIN7BQ9HAP6 207 aa4.2□□□□□ -1.74
SMN1-208ENST00000513228 CPNE3O75131 537 aaKnown RBP4.19□□□□□ -1.74
SMN1-208ENST00000513228 IRAK1P51617 712 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 USP11P51784 963 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 ORC1Q13415 861 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 ADAMTSL4Q6UY14 1074 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 PRR23CQ6ZRP0 262 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.19□□□□□ -1.74
SMN1-208ENST00000513228 TMEM130Q8N3G9 435 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 WNT8BQ93098 351 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 ADAM19Q9H013 955 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 RNF208Q9H0X6 261 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 OSGEPQ9NPF4 335 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 RAD18Q9NS91 495 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 NLRP2Q9NX02 1062 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 PPP4R2Q9NY27 417 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 RAXQ9Y2V3 346 aa4.19□□□□□ -1.74
SMN1-208ENST00000513228 A0A096LPE4 126 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 A0A1W2PPZ6 126 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 BMP3P12645 472 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 TAL1P17542 331 aaPredicted RBP4.18□□□□□ -1.74
SMN1-208ENST00000513228 FSTP19883 344 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 PCDH1Q08174 1060 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 USPL1Q5W0Q7 1092 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 HGSNATQ68CP4 663 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 FOXD4L4Q8WXT5 416 aaPredicted RBP4.18□□□□□ -1.74
SMN1-208ENST00000513228 CYP4F12Q9HCS2 524 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 NPHS2Q9NP85 383 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 SOX13Q9UN79 622 aa4.18□□□□□ -1.74
SMN1-208ENST00000513228 A0A1W2PP55 124 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 NFKBIEO00221 500 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 SOX1O00570 391 aaPredicted RBP4.17□□□□□ -1.74
SMN1-208ENST00000513228 ADAM11O75078 769 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 ZNF157P51786 506 aaPredicted RBP4.17□□□□□ -1.74
SMN1-208ENST00000513228 ARHGAP4P98171 946 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 PDE3AQ14432 1141 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 SPRED3Q2MJR0 410 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 ANKRD34AQ69YU3 496 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 KIAA1211Q6ZU35 1233 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 DMRTB1Q96MA1 342 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 UBL7Q96S82 380 aaPredicted RBP4.17□□□□□ -1.74
SMN1-208ENST00000513228 CORO1BQ9BR76 489 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 PCMTD2Q9NV79 361 aa4.17□□□□□ -1.74
SMN1-208ENST00000513228 SOWAHDA6NJG2 315 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 EIF1AYO14602 144 aaKnown RBP4.16□□□□□ -1.74
SMN1-208ENST00000513228 GSC2O15499 205 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 BRD1O95696 1058 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 CYP11A1P05108 521 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 ESRRAP11474 423 aaPredicted RBP4.16□□□□□ -1.74
SMN1-208ENST00000513228 SSTR4P31391 388 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 NFKBIBQ15653 356 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 AKAP4Q5JQC9 854 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 PEAR1Q5VY43 1037 aaPredicted RBP4.16□□□□□ -1.74
SMN1-208ENST00000513228 BEND4Q6ZU67 534 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 ILDR2Q71H61 639 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 VN1R5Q7Z5H4 357 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 TXNDC2Q86VQ3 553 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 TRIM42Q8IWZ5 723 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 GALNT12Q8IXK2 581 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 DZIP1LQ8IYY4 767 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms