RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ZNF784Q8NCA9 323 aaPredicted RBP20.22■□□□□ 0.83
HMGCL-209ENST00000513148 DBNDD2Q9BQY9 259 aa20.22■□□□□ 0.83
HMGCL-209ENST00000513148 IGHDP01880 384 aa20.21■□□□□ 0.83
HMGCL-209ENST00000513148 CHAF1AQ13111 956 aaPredicted RBP20.21■□□□□ 0.83
HMGCL-209ENST00000513148 CCDC102BQ68D86 513 aa20.21■□□□□ 0.83
HMGCL-209ENST00000513148 CLASRPQ8N2M8 674 aaKnown RBP20.21■□□□□ 0.83
HMGCL-209ENST00000513148 TDRD7Q8NHU6 1098 aaKnown RBP20.21■□□□□ 0.83
HMGCL-209ENST00000513148 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
HMGCL-209ENST00000513148 GPBP1L1Q9HC44 474 aaPredicted RBP20.21■□□□□ 0.83
HMGCL-209ENST00000513148 NMRK2Q9NPI5 230 aa20.21■□□□□ 0.83
HMGCL-209ENST00000513148 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
HMGCL-209ENST00000513148 GMPSP49915 693 aaPredicted RBP20.2■□□□□ 0.82
HMGCL-209ENST00000513148 DBNLQ9UJU6 430 aaKnown RBP20.2■□□□□ 0.82
HMGCL-209ENST00000513148 STRIP1Q5VSL9 837 aa20.19■□□□□ 0.82
HMGCL-209ENST00000513148 RRAGCQ9HB90 399 aa20.19■□□□□ 0.82
HMGCL-209ENST00000513148 COL1A1P02452 1464 aaPredicted RBP20.19■□□□□ 0.82
HMGCL-209ENST00000513148 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
HMGCL-209ENST00000513148 DACT2Q5SW24 774 aa20.19■□□□□ 0.82
HMGCL-209ENST00000513148 GNL3LQ9NVN8 582 aaKnown RBP20.19■□□□□ 0.82
HMGCL-209ENST00000513148 IFIT2P09913 472 aaKnown RBP20.18■□□□□ 0.82
HMGCL-209ENST00000513148 SCNN1DP51172 638 aa20.18■□□□□ 0.82
HMGCL-209ENST00000513148 RSBN1LQ6PCB5 846 aaPredicted RBP20.18■□□□□ 0.82
HMGCL-209ENST00000513148 L3MBTL3Q96JM7 780 aaPredicted RBP20.17■□□□□ 0.82
HMGCL-209ENST00000513148 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
HMGCL-209ENST00000513148 LMOD1P29536 600 aaPredicted RBP20.17■□□□□ 0.82
HMGCL-209ENST00000513148 TTC39AQ5SRH9 613 aa20.17■□□□□ 0.82
HMGCL-209ENST00000513148 GCC1Q96CN9 775 aa20.17■□□□□ 0.82
HMGCL-209ENST00000513148 SCN4AP35499 1836 aa20.16■□□□□ 0.82
HMGCL-209ENST00000513148 RASGRF1Q13972 1273 aa20.16■□□□□ 0.82
HMGCL-209ENST00000513148 CCDC158Q5M9N0 1113 aa20.16■□□□□ 0.82
HMGCL-209ENST00000513148 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
HMGCL-209ENST00000513148 POTECB2RU33 542 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 EPS15P42566 896 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 FAM205AQ6ZU69 1335 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 PI16Q6UXB8 463 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 KIAA0825Q8IV33 1275 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 MICALL2Q8IY33 904 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
HMGCL-209ENST00000513148 IQCA1LA6NCM1 817 aa20.14■□□□□ 0.81
HMGCL-209ENST00000513148 F8W031 263 aaPredicted RBP20.14■□□□□ 0.81
HMGCL-209ENST00000513148 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
HMGCL-209ENST00000513148 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.81
HMGCL-209ENST00000513148 SCARF1Q14162 830 aa20.14■□□□□ 0.81
HMGCL-209ENST00000513148 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
HMGCL-209ENST00000513148 DENND2AQ9ULE3 1009 aa20.14■□□□□ 0.81
HMGCL-209ENST00000513148 ARID4AP29374 1257 aaPredicted RBP20.14■□□□□ 0.81
HMGCL-209ENST00000513148 AGBL3Q8NEM8 1001 aa20.14■□□□□ 0.81
HMGCL-209ENST00000513148 MYO3BQ8WXR4 1341 aa20.13■□□□□ 0.81
HMGCL-209ENST00000513148 MCAMP43121 646 aa20.13■□□□□ 0.81
HMGCL-209ENST00000513148 SMC5Q8IY18 1101 aa20.13■□□□□ 0.81
HMGCL-209ENST00000513148 SEMA3EO15041 775 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 DPF2Q92785 391 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 GMLQ99445 158 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 SNRKQ9NRH2 765 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 EPHX2P34913 555 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
HMGCL-209ENST00000513148 SPATA5Q8NB90 893 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 HMG20BQ9P0W2 317 aa20.12■□□□□ 0.81
HMGCL-209ENST00000513148 AKAP11Q9UKA4 1901 aa20.11■□□□□ 0.81
HMGCL-209ENST00000513148 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
HMGCL-209ENST00000513148 GRIK5Q16478 980 aa20.11■□□□□ 0.81
HMGCL-209ENST00000513148 EAPPQ56P03 285 aaPredicted RBP20.11■□□□□ 0.81
HMGCL-209ENST00000513148 TBC1D22AQ8WUA7 517 aa20.11■□□□□ 0.81
HMGCL-209ENST00000513148 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
HMGCL-209ENST00000513148 H7C1D1 291 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
HMGCL-209ENST00000513148 SAMD7Q7Z3H4 446 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 WDR66Q8TBY9 1149 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 NDUFB9Q9Y6M9 179 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 ADAMTSL1Q8N6G6 1762 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 EGFRP00533 1210 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 FKBP1AP62942 108 aaKnown RBP20.1■□□□□ 0.81
HMGCL-209ENST00000513148 TBC1D10BQ4KMP7 808 aaPredicted RBP20.1■□□□□ 0.81
HMGCL-209ENST00000513148 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 OGFOD1Q8N543 542 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 OTUD7AQ8TE49 926 aaPredicted RBP20.1■□□□□ 0.81
HMGCL-209ENST00000513148 ABCF2Q9UG63 623 aa20.1■□□□□ 0.81
HMGCL-209ENST00000513148 KIF3CO14782 793 aa20.09■□□□□ 0.81
HMGCL-209ENST00000513148 TRPM4Q8TD43 1214 aa20.09■□□□□ 0.81
HMGCL-209ENST00000513148 ADARB2Q9NS39 739 aaKnown RBP20.09■□□□□ 0.81
HMGCL-209ENST00000513148 GSE1Q14687 1217 aa20.09■□□□□ 0.81
HMGCL-209ENST00000513148 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
HMGCL-209ENST00000513148 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
HMGCL-209ENST00000513148 POTEIP0CG38 1075 aa20.08■□□□□ 0.8
HMGCL-209ENST00000513148 POTEJP0CG39 1038 aa20.08■□□□□ 0.8
HMGCL-209ENST00000513148 PRDX5P30044 214 aa20.08■□□□□ 0.8
HMGCL-209ENST00000513148 ZAP70P43403 619 aa20.08■□□□□ 0.8
HMGCL-209ENST00000513148 TBC1D9Q6ZT07 1266 aa20.08■□□□□ 0.8
HMGCL-209ENST00000513148 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
HMGCL-209ENST00000513148 HDAC9Q9UKV0 1011 aa20.07■□□□□ 0.8
HMGCL-209ENST00000513148 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
HMGCL-209ENST00000513148 ZNF280AP59817 542 aaPredicted RBP20.07■□□□□ 0.8
HMGCL-209ENST00000513148 NUCB1Q02818 461 aa20.07■□□□□ 0.8
HMGCL-209ENST00000513148 KIF4BQ2VIQ3 1234 aa20.07■□□□□ 0.8
HMGCL-209ENST00000513148 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms