RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
SDHA-215ENST00000512962 UTP14AQ9BVJ6 771 aaKnown RBP16.26■□□□□ 0.19
SDHA-215ENST00000512962 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
SDHA-215ENST00000512962 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
SDHA-215ENST00000512962 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
SDHA-215ENST00000512962 BBOX1O75936 387 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 HOXB1P14653 301 aaPredicted RBP16.25■□□□□ 0.19
SDHA-215ENST00000512962 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 DPF2Q92785 391 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 CDCA5Q96FF9 252 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
SDHA-215ENST00000512962 SNPHO15079 494 aa16.24■□□□□ 0.19
SDHA-215ENST00000512962 PTPREP23469 700 aa16.24■□□□□ 0.19
SDHA-215ENST00000512962 GRAPQ13588 217 aa16.24■□□□□ 0.19
SDHA-215ENST00000512962 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
SDHA-215ENST00000512962 GRAPLQ8TC17 118 aaPredicted RBP16.24■□□□□ 0.19
SDHA-215ENST00000512962 SCAF8Q9UPN6 1271 aaKnown RBP16.24■□□□□ 0.19
SDHA-215ENST00000512962 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
SDHA-215ENST00000512962 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
SDHA-215ENST00000512962 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
SDHA-215ENST00000512962 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
SDHA-215ENST00000512962 SKIV2LQ15477 1246 aaKnown RBP16.22■□□□□ 0.19
SDHA-215ENST00000512962 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
SDHA-215ENST00000512962 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
SDHA-215ENST00000512962 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
SDHA-215ENST00000512962 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.19
SDHA-215ENST00000512962 ECE2O60344 883 aa16.21■□□□□ 0.19
SDHA-215ENST00000512962 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
SDHA-215ENST00000512962 GPSM2P81274 684 aa16.21■□□□□ 0.19
SDHA-215ENST00000512962 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
SDHA-215ENST00000512962 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
SDHA-215ENST00000512962 R3HDMLQ9H3Y0 253 aa16.21■□□□□ 0.19
SDHA-215ENST00000512962 RCCD1A6NED2 376 aa16.2■□□□□ 0.18
SDHA-215ENST00000512962 C3orf80F5H4A9 247 aa16.2■□□□□ 0.18
SDHA-215ENST00000512962 WASHC4Q2M389 1173 aa16.2■□□□□ 0.18
SDHA-215ENST00000512962 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
SDHA-215ENST00000512962 BRCA2P51587 3418 aa16.2■□□□□ 0.18
SDHA-215ENST00000512962 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
SDHA-215ENST00000512962 FLIIQ13045 1269 aa16.19■□□□□ 0.18
SDHA-215ENST00000512962 HABP4Q5JVS0 413 aaKnown RBP16.19■□□□□ 0.18
SDHA-215ENST00000512962 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
SDHA-215ENST00000512962 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
SDHA-215ENST00000512962 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
SDHA-215ENST00000512962 CENPFP49454 3210 aa16.19■□□□□ 0.18
SDHA-215ENST00000512962 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
SDHA-215ENST00000512962 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
SDHA-215ENST00000512962 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
SDHA-215ENST00000512962 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 NUDT18Q6ZVK8 323 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SDHA-215ENST00000512962 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 PLEKHF1Q96S99 279 aa16.17■□□□□ 0.18
SDHA-215ENST00000512962 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
SDHA-215ENST00000512962 UBE2Q2LH0YL09 131 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 C6orf229H3BNL8 230 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
SDHA-215ENST00000512962 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 HDAC9Q9UKV0 1011 aa16.16■□□□□ 0.18
SDHA-215ENST00000512962 LAMB1P07942 1786 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 GPR25O00155 361 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 ZNF609O15014 1411 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 VIL1P09327 827 aaKnown RBP16.15■□□□□ 0.18
SDHA-215ENST00000512962 TCIRG1Q13488 830 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 SCARF1Q14162 830 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 FBXO46Q6PJ61 603 aaPredicted RBP16.15■□□□□ 0.18
SDHA-215ENST00000512962 PROCA1Q8NCQ7 364 aaPredicted RBP16.15■□□□□ 0.18
SDHA-215ENST00000512962 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
SDHA-215ENST00000512962 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
SDHA-215ENST00000512962 PKN2Q16513 984 aaKnown RBP16.14■□□□□ 0.17
SDHA-215ENST00000512962 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
SDHA-215ENST00000512962 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
SDHA-215ENST00000512962 FXR1P51114 621 aaKnown RBP eCLIP16.13■□□□□ 0.17
SDHA-215ENST00000512962 NFE2L2Q16236 605 aa16.13■□□□□ 0.17
SDHA-215ENST00000512962 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
SDHA-215ENST00000512962 FAM89AQ96GI7 184 aa16.13■□□□□ 0.17
SDHA-215ENST00000512962 GMLQ99445 158 aa16.13■□□□□ 0.17
SDHA-215ENST00000512962 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
SDHA-215ENST00000512962 PNMA3Q9UL41 463 aa16.13■□□□□ 0.17
SDHA-215ENST00000512962 SF3B3Q15393 1217 aaKnown RBP16.12■□□□□ 0.17
SDHA-215ENST00000512962 TMC4Q7Z404 712 aa16.12■□□□□ 0.17
SDHA-215ENST00000512962 TATDN2Q93075 761 aa16.12■□□□□ 0.17
SDHA-215ENST00000512962 KCNK17Q96T54 332 aa16.12■□□□□ 0.17
SDHA-215ENST00000512962 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
SDHA-215ENST00000512962 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
SDHA-215ENST00000512962 DNAJB2P25686 324 aa16.11■□□□□ 0.17
SDHA-215ENST00000512962 TM4SF4P48230 202 aa16.11■□□□□ 0.17
SDHA-215ENST00000512962 OTUD5Q96G74 571 aa16.11■□□□□ 0.17
SDHA-215ENST00000512962 FKBP1BP68106 108 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 CAP1Q01518 475 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 PROX2Q3B8N5 592 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
SDHA-215ENST00000512962 PACS2Q86VP3 889 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms