RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
HTT-210ENST00000512909 ZCCHC6Q5VYS8 1495 aaKnown RBP6.63□□□□□ -1.35
HTT-210ENST00000512909 PODNQ7Z5L7 613 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 SLC7A3Q8WY07 619 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 TTC9Q92623 222 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 TCF12Q99081 682 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
HTT-210ENST00000512909 ABCB6Q9NP58 842 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 KLF15Q9UIH9 416 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 PPME1Q9Y570 386 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.63□□□□□ -1.35
HTT-210ENST00000512909 GRIA4P48058 902 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 PCDH1Q08174 1060 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 RPS26P11Q5JNZ5 115 aaPredicted RBP6.62□□□□□ -1.35
HTT-210ENST00000512909 TRAPPC3LQ5T215 181 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 HHIPQ96QV1 700 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 CBX8Q9HC52 389 aa6.62□□□□□ -1.35
HTT-210ENST00000512909 H3BRJ5 948 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 CELA2BP08218 269 aaPredicted RBP6.61□□□□□ -1.35
HTT-210ENST00000512909 ZNF157P51786 506 aaPredicted RBP6.61□□□□□ -1.35
HTT-210ENST00000512909 RAC1P63000 192 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 MEI1Q5TIA1 1274 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 SV2BQ7L1I2 683 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 LRRC4BQ9NT99 713 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 NAGPAQ9UK23 515 aa6.61□□□□□ -1.35
HTT-210ENST00000512909 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 FBXO24O75426 580 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 ALBP02768 609 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 ITPKAP23677 461 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 LRRC14Q15048 493 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 C9orf131Q5VYM1 1079 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 USP48Q86UV5 1035 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
HTT-210ENST00000512909 EMILIN2Q9BXX0 1053 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 ZNF576Q9H609 170 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
HTT-210ENST00000512909 MYO15BQ96JP2 1530 aa6.6□□□□□ -1.35
HTT-210ENST00000512909 LINC01387J3KSC0 135 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 NFKBIEO00221 500 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 SLURP2P0DP57 97 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
HTT-210ENST00000512909 PIP4K2BP78356 416 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 KRT76Q01546 638 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 GSTM4Q03013 218 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 HP1BP3Q5SSJ5 553 aaPredicted RBP6.59□□□□□ -1.35
HTT-210ENST00000512909 LYPD4Q6UWN0 246 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 ZNF654Q8IZM8 581 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 GLIS3Q8NEA6 775 aa6.59□□□□□ -1.35
HTT-210ENST00000512909 SCRIBQ14160 1630 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 CTSHP09668 335 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 HDLBPQ00341 1268 aaKnown RBP6.58□□□□□ -1.36
HTT-210ENST00000512909 MSL1Q68DK7 614 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 DMRTC2Q8IXT2 367 aaPredicted RBP6.58□□□□□ -1.36
HTT-210ENST00000512909 WNT8BQ93098 351 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 CORO1BQ9BR76 489 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
HTT-210ENST00000512909 MINDY4BA8MYZ0 360 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 CYP11A1P05108 521 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 AFF1P51825 1210 aaKnown RBP6.57□□□□□ -1.36
HTT-210ENST00000512909 ZC3H6P61129 1189 aaKnown RBP6.57□□□□□ -1.36
HTT-210ENST00000512909 FANCCQ00597 558 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 AP3B2Q13367 1082 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 PRRT3Q5FWE3 981 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 C3orf58Q8NDZ4 430 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 SRA1Q9HD15 236 aaKnown RBP6.57□□□□□ -1.36
HTT-210ENST00000512909 MKL2Q9ULH7 1088 aa6.57□□□□□ -1.36
HTT-210ENST00000512909 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.57□□□□□ -1.36
HTT-210ENST00000512909 ESRRAP11474 423 aaPredicted RBP6.56□□□□□ -1.36
HTT-210ENST00000512909 EPHA1P21709 976 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 TRIM28Q13263 835 aaKnown RBP6.56□□□□□ -1.36
HTT-210ENST00000512909 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 SNAP47Q5SQN1 464 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 KLHL23Q8NBE8 558 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 KCNB2Q92953 911 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 ACSBG1Q96GR2 724 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
HTT-210ENST00000512909 TGIF2Q9GZN2 237 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 OSGEPQ9NPF4 335 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 NOP53Q9NZM5 478 aaKnown RBP6.56□□□□□ -1.36
HTT-210ENST00000512909 INPP5FQ9Y2H2 1132 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 STARD13Q9Y3M8 1113 aa6.56□□□□□ -1.36
HTT-210ENST00000512909 DCAF1Q9Y4B6 1507 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 SHROOM4Q9ULL8 1493 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 FSCN2O14926 492 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 B3GALT4O96024 378 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 NME2P22392 152 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms