RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 FAM46AQ96IP4 442 aaKnown RBP4.7□□□□□ -1.66
PDGFC-208ENST00000512711 H3BRB1 525 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 TXNDC2Q86VQ3 553 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 TRIM42Q8IWZ5 723 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 RETREG2Q8NC44 543 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 SNX29Q8TEQ0 813 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 TUT1Q9H6E5 874 aaKnown RBP4.69□□□□□ -1.66
PDGFC-208ENST00000512711 OSGEPQ9NPF4 335 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 STOML1Q9UBI4 398 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 RNF112Q9ULX5 631 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 MTMR7Q9Y216 660 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 RAXQ9Y2V3 346 aa4.69□□□□□ -1.66
PDGFC-208ENST00000512711 A0A1W2PP55 124 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 ESRRAP11474 423 aaPredicted RBP4.68□□□□□ -1.66
PDGFC-208ENST00000512711 EDN3P14138 238 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 GRIA4P48058 902 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 PREPP48147 710 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 CABP4P57796 275 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 EHHADHQ08426 723 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 C19orf57Q0VDD7 668 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 ORC1Q13415 861 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 IKBKEQ14164 716 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 MCTP1Q6DN14 999 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 WNT8BQ93098 351 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 TCF12Q99081 682 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 BHLHE41Q9C0J9 482 aaPredicted RBP4.68□□□□□ -1.66
PDGFC-208ENST00000512711 TIMELESSQ9UNS1 1208 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 USTQ9Y2C2 406 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 AMOTL2Q9Y2J4 779 aa4.68□□□□□ -1.66
PDGFC-208ENST00000512711 FAM177BA6PVY3 158 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 DHX15O43143 795 aaKnown RBP4.67□□□□□ -1.66
PDGFC-208ENST00000512711 IGHA2P01877 340 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 BMP3P12645 472 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 DRD2P14416 443 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 SSTR4P31391 388 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 GLYCTKQ8IVS8 523 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 GALNT12Q8IXK2 581 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 SHISA5Q8N114 240 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 DCAF11Q8TEB1 546 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 UTP4Q969X6 686 aaKnown RBP4.67□□□□□ -1.66
PDGFC-208ENST00000512711 MYRFLQ96LU7 910 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 RUSC1Q9BVN2 902 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 C7orf69Q9H7B7 122 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 EGFL7Q9UHF1 273 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 BRPF3Q9ULD4 1205 aa4.67□□□□□ -1.66
PDGFC-208ENST00000512711 COL17A1Q9UMD9 1497 aaPredicted RBP4.67□□□□□ -1.66
PDGFC-208ENST00000512711 A0A096LPE4 126 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 LOC100289279A0A1B0GTE1 492 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 A0A1W2PPZ6 126 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 ADAMTS4O75173 837 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 ECEL1O95672 775 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 TGFB1P01137 390 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 IGLV1-40P01703 118 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 CTSBP07858 339 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 GSTM4Q03013 218 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 CCNJLQ8IV13 435 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 FAM20CQ8IXL6 584 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 C12orf50Q8NA57 414 aaPredicted RBP4.66□□□□□ -1.66
PDGFC-208ENST00000512711 TMPRSS13Q9BYE2 586 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 CEP41Q9BYV8 373 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 NIF3L1Q9GZT8 377 aa4.66□□□□□ -1.66
PDGFC-208ENST00000512711 MEGF11A6BM72 1044 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 PRR19A6NJB7 356 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 ARL4DP49703 201 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 NFIAQ12857 509 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 ZDHHC13Q8IUH4 622 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 FAM83CQ9BQN1 747 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 USP26Q9BXU7 913 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 NRSN2Q9GZP1 204 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 RNF208Q9H0X6 261 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 LIN7BQ9HAP6 207 aa4.65□□□□□ -1.67
PDGFC-208ENST00000512711 GPR182O15218 404 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 SART1O43290 800 aaKnown RBP4.64□□□□□ -1.67
PDGFC-208ENST00000512711 SGO2Q562F6 1265 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 EXOSC6Q5RKV6 272 aaKnown RBP4.64□□□□□ -1.67
PDGFC-208ENST00000512711 RNF43Q68DV7 783 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 BEND4Q6ZU67 534 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 SLC51AQ86UW1 340 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 CLEC10AQ8IUN9 316 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 FAM129BQ96TA1 746 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 KCNF1Q9H3M0 494 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 PCMTD2Q9NV79 361 aa4.64□□□□□ -1.67
PDGFC-208ENST00000512711 EIF1AYO14602 144 aaKnown RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 PAX4O43316 350 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 TIAF1O95411 115 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 MAP4P27816 1152 aaKnown RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 TXKP42681 527 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 CD97P48960 835 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 PCDH1Q08174 1060 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 KIAA0319Q5VV43 1072 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 NUTM2GQ5VZR2 741 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 ANKRD34AQ69YU3 496 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 CDPF1Q6NVV7 123 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 FDX2Q6P4F2 183 aa4.63□□□□□ -1.67
PDGFC-208ENST00000512711 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 SMG8Q8ND04 991 aaKnown RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 EPS8L3Q8TE67 593 aaKnown RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 SOX17Q9H6I2 414 aaPredicted RBP4.63□□□□□ -1.67
PDGFC-208ENST00000512711 NPHS2Q9NP85 383 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms