RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 HOOK2Q96ED9 719 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 SHDQ96IW2 340 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 NT5C1AQ9BXI3 368 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 RTFDC1Q9BY42 306 aaPredicted RBP4.08□□□□□ -1.76
PVT1-202ENST00000512617 SRCIN1Q9C0H9 1055 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 LRRC27Q9C0I9 530 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 TSPAN10Q9H1Z9 355 aaPredicted RBP4.08□□□□□ -1.76
PVT1-202ENST00000512617 CLIC5Q9NZA1 410 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 MRC2Q9UBG0 1479 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 ZNF180Q9UJW8 692 aa4.08□□□□□ -1.76
PVT1-202ENST00000512617 FANCD2Q9BXW9 1451 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 A0A087X0B3 334 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 A0A1W2PRU2 124 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 FIBPO43427 364 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 DIAPH1O60610 1272 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 RAPGEF3O95398 923 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 HSP90AB1P08238 724 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 SRGNP10124 158 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 RBP3P10745 1247 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 EPB42P16452 691 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 JUNDP17535 347 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 HTR3AP46098 478 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 SARSP49591 514 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 HDGFP51858 240 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 ITKQ08881 620 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 SSRP1Q08945 709 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 BIRC3Q13489 604 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 TOMM20Q15388 145 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 FXNQ16595 210 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 C8orf34Q49A92 452 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 AKAP4Q5JQC9 854 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 HYIQ5T013 277 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 IER5LQ5T953 404 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 LARP1BQ659C4 914 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 MMS22LQ6ZRQ5 1243 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 PODNQ7Z5L7 613 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 RNF180Q86T96 592 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 PJA1Q8NG27 643 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 EPS8L3Q8TE67 593 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 CHMP4CQ96CF2 233 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 NUDT16Q96DE0 195 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 MPP4Q96JB8 637 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 TMEM74Q96NL1 305 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 CAMKK2Q96RR4 588 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 TSPAN18Q96SJ8 248 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 ELAC2Q9BQ52 826 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 USB1Q9BQ65 265 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 C2orf49Q9BVC5 232 aaPredicted RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 OBP2AQ9NY56 170 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 FAM13BQ9NYF5 915 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 C9orf78Q9NZ63 289 aaPredicted RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 LRFN2Q9ULH4 789 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 SLC27A5Q9Y2P5 690 aa4.07□□□□□ -1.76
PVT1-202ENST00000512617 SUPT16HQ9Y5B9 1047 aaKnown RBP4.07□□□□□ -1.76
PVT1-202ENST00000512617 CEP164Q9UPV0 1460 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 VSTM5A8MXK1 200 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 GOLIM4O00461 696 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 PRPF3O43395 683 aaKnown RBP4.06□□□□□ -1.76
PVT1-202ENST00000512617 PTPREP23469 700 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 IRS1P35568 1242 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 ZAP70P43403 619 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 DGKGP49619 791 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 EIF6P56537 245 aaKnown RBP4.06□□□□□ -1.76
PVT1-202ENST00000512617 PABPC4Q13310 644 aaKnown RBP eCLIP4.06□□□□□ -1.763e-8■■□□□ 12.5
PVT1-202ENST00000512617 MTMR1Q13613 665 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 ALDH1L2Q3SY69 923 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 KMT5BQ4FZB7 885 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 TMEM67Q5HYA8 995 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 FAM26DQ5JW98 314 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 MORN1Q5T089 497 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 C1QTNF12Q5T7M4 302 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 C1orf53Q5VUE5 145 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 TTLL5Q6EMB2 1281 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 RNF19BQ6ZMZ0 732 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 SPATC1Q76KD6 591 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 NECAB2Q7Z6G3 386 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 KRT77Q7Z794 578 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 ZSCAN30Q86W11 494 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 AFAP1L2Q8N4X5 818 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 FAM169BQ8N8A8 192 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 IPO4Q8TEX9 1081 aaKnown RBP4.06□□□□□ -1.76
PVT1-202ENST00000512617 NKD1Q969G9 470 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 CCDC74AQ96AQ1 378 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 TIFAQ96CG3 184 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 TTC14Q96N46 770 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 STRBPQ96SI9 672 aaKnown RBP4.06□□□□□ -1.76
PVT1-202ENST00000512617 CRBNQ96SW2 442 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 YIPF4Q9BSR8 244 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 SARGQ9BW04 601 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 CARD14Q9BXL6 1004 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 CSRNP2Q9H175 543 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 PRDM11Q9NQV5 511 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 UBP1Q9NZI7 540 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 MAPRE3Q9UPY8 281 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 CHMP3Q9Y3E7 222 aa4.06□□□□□ -1.76
PVT1-202ENST00000512617 URB2Q14146 1524 aaKnown RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 CCDC88BA6NC98 1476 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 MAGEB6P1A0A0J9YX57 407 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 TTC36A6NLP5 189 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PRSS47A8MTI9 375 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms