RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SPINT1O43278 529 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 RNASEH2AO75792 299 aaKnown RBP7.79□□□□□ -1.16
CHD1-208ENST00000512392 CNGA1P29973 690 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
CHD1-208ENST00000512392 C21orf62-AS1Q17RA5 79 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 TSPAN18Q96SJ8 248 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 ZIM2Q9NZV7 527 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 DAAM1Q9Y4D1 1078 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 A0A1W2PRU2 124 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 LCE2BO14633 110 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 PTCD1O75127 700 aaKnown RBP7.79□□□□□ -1.16
CHD1-208ENST00000512392 BMP2P12643 396 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 BMP1P13497 986 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 ESCO1Q5FWF5 840 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 FAM83BQ5T0W9 1011 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 TSEN2Q8NCE0 465 aaKnown RBP7.79□□□□□ -1.16
CHD1-208ENST00000512392 SAP130Q9H0E3 1048 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 CHMP4BQ9H444 224 aaKnown RBP7.79□□□□□ -1.16
CHD1-208ENST00000512392 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
CHD1-208ENST00000512392 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
CHD1-208ENST00000512392 PRPF3O43395 683 aaKnown RBP7.78□□□□□ -1.16
CHD1-208ENST00000512392 EIF1AXP47813 144 aaKnown RBP7.78□□□□□ -1.16
CHD1-208ENST00000512392 MEI1Q5TIA1 1274 aa7.78□□□□□ -1.16
CHD1-208ENST00000512392 PPARGC1BQ86YN6 1023 aaKnown RBP7.78□□□□□ -1.16
CHD1-208ENST00000512392 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
CHD1-208ENST00000512392 ZNF395Q9H8N7 513 aaPredicted RBP7.78□□□□□ -1.16
CHD1-208ENST00000512392 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
CHD1-208ENST00000512392 KAT6BQ8WYB5 2073 aa7.77□□□□□ -1.16
CHD1-208ENST00000512392 WASLO00401 505 aaPredicted RBP7.77□□□□□ -1.17
CHD1-208ENST00000512392 CLN3Q13286 438 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 SLC4A8Q2Y0W8 1093 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
CHD1-208ENST00000512392 C6orf118Q5T5N4 469 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 ALG1LQ6GMV1 187 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 CELF2-AS1Q8N7Q2 184 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 TEX19Q8NA77 164 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 SEC16BQ96JE7 1060 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 HIP1RO75146 1068 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 MYL3P08590 195 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 UBR7Q8N806 425 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 ALKBH8Q96BT7 664 aaKnown RBP7.77□□□□□ -1.17
CHD1-208ENST00000512392 CD2APQ9Y5K6 639 aa7.77□□□□□ -1.17
CHD1-208ENST00000512392 AKAP10O43572 662 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 SCNN1DP51172 638 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 GDF10P55107 478 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 ALDH1L2Q3SY69 923 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 LRP10Q7Z4F1 713 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 ZFP42Q96MM3 310 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 ETNK1Q9HBU6 452 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 SENP2Q9HC62 589 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 LUZP4Q9P127 313 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 DIS3Q9Y2L1 958 aaKnown RBP7.76□□□□□ -1.17
CHD1-208ENST00000512392 NUB1Q9Y5A7 615 aa7.76□□□□□ -1.17
CHD1-208ENST00000512392 INHAP05111 366 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 ST13P50502 369 aaKnown RBP7.75□□□□□ -1.17
CHD1-208ENST00000512392 ERP27Q96DN0 273 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 EFR3BQ9Y2G0 817 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
CHD1-208ENST00000512392 TTC36A6NLP5 189 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 TMEM229AB2RXF0 380 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 MEN1O00255 615 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 IL2RAP01589 272 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 SCP2P22307 547 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 MORC3Q14149 939 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 TOMM20Q15388 145 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
CHD1-208ENST00000512392 CNKSR1Q969H4 720 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 KIFC2Q96AC6 838 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 INSM2Q96T92 566 aaPredicted RBP7.75□□□□□ -1.17
CHD1-208ENST00000512392 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 RAB6BQ9NRW1 208 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 CLIC5Q9NZA1 410 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 NOL7Q9UMY1 257 aaKnown RBP7.75□□□□□ -1.17
CHD1-208ENST00000512392 SLC45A1Q9Y2W3 748 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 MSRB2Q9Y3D2 182 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
CHD1-208ENST00000512392 BACH1O14867 736 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 PIP5K1CO60331 668 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 KATNA1O75449 491 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 GPC1P35052 558 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 RNF144AP50876 292 aaPredicted RBP7.74□□□□□ -1.17
CHD1-208ENST00000512392 GPSM2P81274 684 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 IL31Q6EBC2 164 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 CASC1Q6TDU7 716 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 HDGFL2Q7Z4V5 671 aaPredicted RBP7.74□□□□□ -1.17
CHD1-208ENST00000512392 THNSL2Q86YJ6 484 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 HDAC9Q9UKV0 1011 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
CHD1-208ENST00000512392 USP31Q70CQ4 1352 aa7.74□□□□□ -1.17
CHD1-208ENST00000512392 SOS2Q07890 1332 aaPredicted RBP7.73□□□□□ -1.17
CHD1-208ENST00000512392 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
CHD1-208ENST00000512392 EPB42P16452 691 aa7.73□□□□□ -1.17
CHD1-208ENST00000512392 NEK3P51956 506 aa7.73□□□□□ -1.17
CHD1-208ENST00000512392 ARMC3Q5W041 872 aa7.73□□□□□ -1.17
CHD1-208ENST00000512392 ERMP1Q7Z2K6 904 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms