RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 TRPM4Q8TD43 1214 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 ZNF609O15014 1411 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 COL1A1P02452 1464 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 TBC1D10BQ4KMP7 808 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 STRIP1Q5VSL9 837 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 LMOD1P29536 600 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-214ENST00000512234 HIRAP54198 1017 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-214ENST00000512234 GMLQ99445 158 aa18.93■□□□□ 0.62
SQSTM1-214ENST00000512234 AKAP2Q9Y2D5 859 aa18.93■□□□□ 0.62
SQSTM1-214ENST00000512234 ASTN2O75129 1339 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-214ENST00000512234 SCARF1Q14162 830 aa18.92■□□□□ 0.62
SQSTM1-214ENST00000512234 AACSQ86V21 672 aa18.92■□□□□ 0.62
SQSTM1-214ENST00000512234 DBNLQ9UJU6 430 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-214ENST00000512234 ZNF646O15015 1829 aaPredicted RBP18.92■□□□□ 0.62
SQSTM1-214ENST00000512234 IGHDP01880 384 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 GORABQ5T7V8 394 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 SCAF8Q9UPN6 1271 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 DLK2Q6UY11 383 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 SNRKQ9NRH2 765 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
SQSTM1-214ENST00000512234 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
SQSTM1-214ENST00000512234 RASGRF1Q13972 1273 aa18.9■□□□□ 0.62
SQSTM1-214ENST00000512234 MFSD14BQ5SR56 506 aa18.9■□□□□ 0.62
SQSTM1-214ENST00000512234 C16orf71Q8IYS4 520 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-214ENST00000512234 DPF2Q92785 391 aa18.89■□□□□ 0.61
SQSTM1-214ENST00000512234 FAM205AQ6ZU69 1335 aa18.89■□□□□ 0.61
SQSTM1-214ENST00000512234 H7C1D1 291 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 USP17L8P0C7I0 530 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 MAP1SQ66K74 1059 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 AGBL3Q8NEM8 1001 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 GPR108Q9NPR9 543 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 AOX1Q06278 1338 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 PSME4Q14997 1843 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 HSP90AB4PQ58FF6 505 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 TBC1D9Q6ZT07 1266 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 ADARB2Q9NS39 739 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-214ENST00000512234 RPS12P25398 132 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-214ENST00000512234 HMG20BQ9P0W2 317 aa18.87■□□□□ 0.61
SQSTM1-214ENST00000512234 ARAP2Q8WZ64 1704 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 SCN4AP35499 1836 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 TOMM70O94826 608 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 MCAMP43121 646 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 TTC39AQ5SRH9 613 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 MYOZ2Q9NPC6 264 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 PRDX5P30044 214 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 ZNF280AP59817 542 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 KIF4BQ2VIQ3 1234 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 OTUD7AQ8TE49 926 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-214ENST00000512234 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-214ENST00000512234 ABCF2Q9UG63 623 aa18.84■□□□□ 0.61
SQSTM1-214ENST00000512234 ADAMTSL1Q8N6G6 1762 aa18.84■□□□□ 0.61
SQSTM1-214ENST00000512234 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 ARID4AP29374 1257 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 CCDC158Q5M9N0 1113 aa18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 USP50Q70EL3 339 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 SPATA5Q8NB90 893 aa18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 DENND2AQ9ULE3 1009 aa18.83■□□□□ 0.61
SQSTM1-214ENST00000512234 TRAF5O00463 557 aa18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 ZAP70P43403 619 aa18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 RBM5P52756 815 aaKnown RBP eCLIP18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 DIXDC1Q155Q3 683 aa18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 PNMA8AQ86V59 439 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 OGFOD1Q8N543 542 aa18.83■□□□□ 0.6
SQSTM1-214ENST00000512234 MYO3BQ8WXR4 1341 aa18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 GLIS2Q9BZE0 524 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-214ENST00000512234 WNT10BO00744 389 aa18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 C1QTNF8P60827 252 aa18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 WDR66Q8TBY9 1149 aa18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
SQSTM1-214ENST00000512234 CYP2E1P05181 493 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 HTRA3P83110 453 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 ANGEL2Q5VTE6 544 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 GGA3Q9NZ52 723 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
SQSTM1-214ENST00000512234 CLRN2A0PK11 232 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms