RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 PRKCZQ05513 592 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 CCL15Q16663 113 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 FAM43AQ8N2R8 423 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 AGBL3Q8NEM8 1001 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 MS4A4AQ96JQ5 239 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 TESK2Q96S53 571 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 PRDM12Q9H4Q4 367 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 MAST4O15021 2626 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 LAMB1P07942 1786 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 LAMB2P55268 1798 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 RTL9Q8NET4 1388 aa8.61□□□□□ -1.03
CLDND1-225ENST00000512147 NBPF26B4DH59 902 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 ECE2O60344 883 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 BBOX1O75936 387 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 ELNP15502 786 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 GTF2A2P52657 109 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
CLDND1-225ENST00000512147 NBPF9Q3BBW0 867 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLDND1-225ENST00000512147 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
CLDND1-225ENST00000512147 NCOR2Q9Y618 2525 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 MYO9BQ13459 2157 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 ERC2O15083 957 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 TLL1O43897 1013 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 A1BGP04217 495 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 U2AF1L5P0DN76 240 aaPredicted RBP8.59□□□□□ -1.03
CLDND1-225ENST00000512147 U2AF1Q01081 240 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLDND1-225ENST00000512147 ST3GAL2Q16842 350 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 NBPF10Q6P3W6 841 aaKnown RBP8.59□□□□□ -1.03
CLDND1-225ENST00000512147 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 TIFAQ96CG3 184 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
CLDND1-225ENST00000512147 PFASO15067 1338 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 RIF1Q5UIP0 2472 aaKnown RBP8.58□□□□□ -1.04
CLDND1-225ENST00000512147 FAM208BQ5VWN6 2430 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 IREB2P48200 963 aaKnown RBP8.58□□□□□ -1.04
CLDND1-225ENST00000512147 FCGRTP55899 365 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 DOK7Q18PE1 504 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 LRRC26Q2I0M4 334 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 OPTNQ96CV9 577 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 PRRX2Q99811 253 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 ZCCHC17Q9NP64 241 aaKnown RBP8.58□□□□□ -1.04
CLDND1-225ENST00000512147 ABCC12Q96J65 1359 aa8.58□□□□□ -1.04
CLDND1-225ENST00000512147 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 G3V3G9 751 aa8.57□□□□□ -1.04
CLDND1-225ENST00000512147 FYB1O15117 783 aa8.57□□□□□ -1.04
CLDND1-225ENST00000512147 ADGRE1Q14246 886 aa8.57□□□□□ -1.04
CLDND1-225ENST00000512147 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
CLDND1-225ENST00000512147 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 APOBEC3FQ8IUX4 373 aaKnown RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 RNPC3Q96LT9 517 aaKnown RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 CPA4Q9UI42 421 aa8.57□□□□□ -1.04
CLDND1-225ENST00000512147 RALYQ9UKM9 306 aaKnown RBP8.57□□□□□ -1.04
CLDND1-225ENST00000512147 USP34Q70CQ2 3546 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 HERVK_113Q902F9 699 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 ELP3Q9H9T3 547 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 CD320Q9NPF0 282 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 GABRQQ9UN88 632 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 ZFHX4Q86UP3 3567 aa8.56□□□□□ -1.04
CLDND1-225ENST00000512147 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
CLDND1-225ENST00000512147 DDX60LQ5H9U9 1706 aaKnown RBP8.55□□□□□ -1.04
CLDND1-225ENST00000512147 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 WNT10BO00744 389 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 FLT3LGP49771 235 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 SUPT20HL1Q3ZLR7 823 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 DGLUCYQ7Z3D6 616 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 OGFOD1Q8N543 542 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 EYA3Q99504 573 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 COG5Q9UP83 839 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 FAM186AA6NE01 2351 aa8.55□□□□□ -1.04
CLDND1-225ENST00000512147 ABCC4O15439 1325 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 CETPP11597 493 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 COL6A1P12109 1028 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 IRF5Q13568 498 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 GJD3Q8N144 294 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 PUS7Q96PZ0 661 aaKnown RBP8.54□□□□□ -1.04
CLDND1-225ENST00000512147 LGR6Q9HBX8 967 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 HMX1Q9NP08 348 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-225ENST00000512147 OGDHLQ9ULD0 1010 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
CLDND1-225ENST00000512147 ZNF292O60281 2723 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 WDFY4Q6ZS81 3184 aa8.54□□□□□ -1.04
CLDND1-225ENST00000512147 CFAP47Q6ZTR5 3102 aa8.53□□□□□ -1.04
CLDND1-225ENST00000512147 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
CLDND1-225ENST00000512147 MTMR14Q8NCE2 650 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms