RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 RPRD2Q5VT52 1461 aaKnown RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 ST5P78524 1137 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 UTP11Q9Y3A2 253 aaKnown RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 PUS7Q96PZ0 661 aaKnown RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 CCDC8Q9H0W5 538 aaPredicted RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 UBXN1Q04323 297 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 F13A1P00488 732 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 STK10O94804 968 aaKnown RBP16.29■□□□□ 0.2
TRIO-218ENST00000512070 KRT2P35908 639 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 SLC8A3P57103 927 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 KRT79Q5XKE5 535 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
TRIO-218ENST00000512070 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 FEZ2Q9UHY8 353 aaPredicted RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 KLF18A0A0U1RQI7 1052 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 PPP2R5EQ16537 467 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 ELP1O95163 1332 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 SELENOSQ9BQE4 189 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 NUF2Q9BZD4 464 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 SNRPA1P09661 255 aaKnown RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 CCDC62Q6P9F0 684 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 IFT20Q8IY31 132 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 IMPACTQ9P2X3 320 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 VPS18Q9P253 973 aa16.28■□□□□ 0.2
TRIO-218ENST00000512070 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
TRIO-218ENST00000512070 PLCB3Q01970 1234 aa16.27■□□□□ 0.2
TRIO-218ENST00000512070 NEDD9Q14511 834 aa16.27■□□□□ 0.2
TRIO-218ENST00000512070 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
TRIO-218ENST00000512070 NUP58Q9BVL2 599 aa16.27■□□□□ 0.2
TRIO-218ENST00000512070 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
TRIO-218ENST00000512070 FAM13AO94988 1023 aa16.27■□□□□ 0.2
TRIO-218ENST00000512070 CCT6BQ92526 530 aa16.27■□□□□ 0.19
TRIO-218ENST00000512070 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.19
TRIO-218ENST00000512070 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.19
TRIO-218ENST00000512070 RILPL1Q5EBL4 403 aa16.27■□□□□ 0.19
TRIO-218ENST00000512070 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.19
TRIO-218ENST00000512070 AFAP1L1Q8TED9 768 aa16.27■□□□□ 0.19
TRIO-218ENST00000512070 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.19
TRIO-218ENST00000512070 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.19
TRIO-218ENST00000512070 PPFIA1Q13136 1202 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 AOPEPQ8N6M6 819 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 GIPC1O14908 333 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 IL15P40933 162 aaPredicted RBP16.26■□□□□ 0.19
TRIO-218ENST00000512070 USP48Q86UV5 1035 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 ZEB2O60315 1214 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 ALDH1L1O75891 902 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 TERF1P54274 439 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 LGSNQ5TDP6 509 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
TRIO-218ENST00000512070 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
TRIO-218ENST00000512070 NAPAP54920 295 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 CCDC186Q7Z3E2 898 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 NUP160Q12769 1436 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 PLCD1P51178 756 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 CEP120Q8N960 986 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 PRPF31Q8WWY3 499 aaKnown RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 VCX3AQ9NNX9 186 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 TMOD4Q9NZQ9 345 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 MTMR3Q13615 1198 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 NUCKS1Q9H1E3 243 aaKnown RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 AFMP43652 599 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 SARNPP82979 210 aaKnown RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
TRIO-218ENST00000512070 ZNF710Q8N1W2 664 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 ESYT1Q9BSJ8 1104 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 STMN1P16949 149 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 PSMD1Q99460 953 aa16.25■□□□□ 0.19
TRIO-218ENST00000512070 EPB41P11171 864 aaKnown RBP16.24■□□□□ 0.19
TRIO-218ENST00000512070 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 BAG1Q99933 345 aaPredicted RBP16.24■□□□□ 0.19
TRIO-218ENST00000512070 SYCE1Q8N0S2 351 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 LLPHQ9BRT6 129 aaKnown RBP16.24■□□□□ 0.19
TRIO-218ENST00000512070 SERPINA10Q9UK55 444 aa16.24■□□□□ 0.19
TRIO-218ENST00000512070 ZNF354CQ86Y25 554 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms