RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 CCDC102BQ68D86 513 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 MAST2Q6P0Q8 1798 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
SUB1-210ENST00000511988 MYH7P12883 1935 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 SEMA3EO15041 775 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
SUB1-210ENST00000511988 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 RTKN2Q8IZC4 609 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 EYA3Q99504 573 aa12.39□□□□□ -0.43
SUB1-210ENST00000511988 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
SUB1-210ENST00000511988 GNL3LQ9NVN8 582 aaKnown RBP12.39□□□□□ -0.43
SUB1-210ENST00000511988 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 SNAP23O00161 211 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 PHKA1P46020 1223 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
SUB1-210ENST00000511988 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 PSMD1Q99460 953 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 HAUS7Q99871 368 aa12.38□□□□□ -0.43
SUB1-210ENST00000511988 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 C21orf2O43822 256 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 KLRK1P26718 216 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
SUB1-210ENST00000511988 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
SUB1-210ENST00000511988 POLLQ9UGP5 575 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 PSME4Q14997 1843 aa12.37□□□□□ -0.43
SUB1-210ENST00000511988 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
SUB1-210ENST00000511988 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 SDSP20132 328 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 MCAMP43121 646 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 GYG1P46976 350 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 BCAMP50895 628 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 RASSF7Q02833 373 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 RASGRF1Q13972 1273 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
SUB1-210ENST00000511988 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
SUB1-210ENST00000511988 LTBP3Q9NS15 1303 aa12.36□□□□□ -0.43
SUB1-210ENST00000511988 CDC45O75419 566 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
SUB1-210ENST00000511988 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
SUB1-210ENST00000511988 SPATA5Q8NB90 893 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
SUB1-210ENST00000511988 COA1Q9GZY4 146 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 PAG1Q9NWQ8 432 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 DENND2AQ9ULE3 1009 aa12.35□□□□□ -0.43
SUB1-210ENST00000511988 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
SUB1-210ENST00000511988 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
SUB1-210ENST00000511988 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
SUB1-210ENST00000511988 POTECB2RU33 542 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 HIP1O00291 1037 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 IL1R1P14778 569 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 SCARF1Q14162 830 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 LRRFIP1Q32MZ4 808 aaKnown RBP12.34□□□□□ -0.43
SUB1-210ENST00000511988 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 RILPL2Q969X0 211 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
SUB1-210ENST00000511988 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 HMG20BQ9P0W2 317 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
SUB1-210ENST00000511988 GOLIM4O00461 696 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
SUB1-210ENST00000511988 IGSF3O75054 1194 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
SUB1-210ENST00000511988 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 ZAP70P43403 619 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
SUB1-210ENST00000511988 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 TDRD7Q8NHU6 1098 aaKnown RBP12.33□□□□□ -0.44
SUB1-210ENST00000511988 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 MCOLN1Q9GZU1 580 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
SUB1-210ENST00000511988 MYO5AQ9Y4I1 1855 aaKnown RBP12.32□□□□□ -0.44
SUB1-210ENST00000511988 G3V3G9 751 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 MAP4K4O95819 1239 aaPredicted RBP12.32□□□□□ -0.44
SUB1-210ENST00000511988 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 PI16Q6UXB8 463 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
SUB1-210ENST00000511988 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
SUB1-210ENST00000511988 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
SUB1-210ENST00000511988 DICER1Q9UPY3 1922 aaKnown RBP12.31□□□□□ -0.44
SUB1-210ENST00000511988 SCN9AQ15858 1988 aa12.31□□□□□ -0.44
SUB1-210ENST00000511988 NFKBIEO00221 500 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms