RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 FOXK2Q01167 660 aa9.56□□□□□ -0.88
NR1I3-229ENST00000511748 PTSQ03393 145 aa9.56□□□□□ -0.88
NR1I3-229ENST00000511748 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
NR1I3-229ENST00000511748 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 USP31Q70CQ4 1352 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 BACH1O14867 736 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 PHKA2P46019 1235 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
NR1I3-229ENST00000511748 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
NR1I3-229ENST00000511748 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-229ENST00000511748 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
NR1I3-229ENST00000511748 SHANK3Q9BYB0 1731 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 KTN1Q86UP2 1357 aaKnown RBP9.54□□□□□ -0.88
NR1I3-229ENST00000511748 M0R2N6 131 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 NBPF1Q3BBV0 1214 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 TSPAN10Q9H1Z9 355 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-229ENST00000511748 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
NR1I3-229ENST00000511748 FAM208AQ9UK61 1670 aaKnown RBP9.54□□□□□ -0.88
NR1I3-229ENST00000511748 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 C21orf2O43822 256 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
NR1I3-229ENST00000511748 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 FAM200AQ8TCP9 573 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
NR1I3-229ENST00000511748 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.88
NR1I3-229ENST00000511748 SBNO2Q9Y2G9 1366 aa9.52□□□□□ -0.88
NR1I3-229ENST00000511748 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 VEGFBP49765 207 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 MON2Q7Z3U7 1717 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 SLC9A9Q8IVB4 645 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
NR1I3-229ENST00000511748 HSPA6P17066 643 aa9.51□□□□□ -0.89
NR1I3-229ENST00000511748 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
NR1I3-229ENST00000511748 TAS1R3Q7RTX0 852 aa9.51□□□□□ -0.89
NR1I3-229ENST00000511748 CGNL1Q0VF96 1302 aa9.51□□□□□ -0.89
NR1I3-229ENST00000511748 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 HDGFL2Q7Z4V5 671 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-229ENST00000511748 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 ZNF775Q96BV0 537 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-229ENST00000511748 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-229ENST00000511748 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
NR1I3-229ENST00000511748 LY75O60449 1722 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 LTN1O94822 1766 aa9.5□□□□□ -0.89
NR1I3-229ENST00000511748 NSD3Q9BZ95 1437 aa9.49□□□□□ -0.89
NR1I3-229ENST00000511748 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
NR1I3-229ENST00000511748 GNASQ5JWF2 1037 aa9.49□□□□□ -0.89
NR1I3-229ENST00000511748 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
NR1I3-229ENST00000511748 ADCY9O60503 1353 aa9.49□□□□□ -0.89
NR1I3-229ENST00000511748 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 WDR44Q5JSH3 913 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 IP6K1Q92551 441 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 NXF1Q9UBU9 619 aaKnown RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 CCNL1Q9UK58 526 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 ROCK2O75116 1388 aaKnown RBP9.48□□□□□ -0.89
NR1I3-229ENST00000511748 USP47Q96K76 1375 aa9.48□□□□□ -0.89
NR1I3-229ENST00000511748 TMEM88BA6NKF7 163 aa9.47□□□□□ -0.89
NR1I3-229ENST00000511748 YBX3P16989 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
NR1I3-229ENST00000511748 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
NR1I3-229ENST00000511748 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
NR1I3-229ENST00000511748 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-229ENST00000511748 KLRG1Q96E93 195 aa9.47□□□□□ -0.89
NR1I3-229ENST00000511748 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
NR1I3-229ENST00000511748 THBS1P07996 1170 aa9.46□□□□□ -0.9
NR1I3-229ENST00000511748 WEE1P30291 646 aa9.46□□□□□ -0.9
NR1I3-229ENST00000511748 TEAD4Q15561 434 aa9.46□□□□□ -0.9
NR1I3-229ENST00000511748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-229ENST00000511748 PRIMPOLQ96LW4 560 aa9.46□□□□□ -0.9
NR1I3-229ENST00000511748 DYRK1BQ9Y463 629 aa9.46□□□□□ -0.9
NR1I3-229ENST00000511748 EML1O00423 815 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
NR1I3-229ENST00000511748 MSX1P28360 303 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 NOS2P35228 1153 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 TXLNAP40222 546 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
NR1I3-229ENST00000511748 OCLNQ16625 522 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 ZCRB1Q8TBF4 217 aaKnown RBP9.45□□□□□ -0.9
NR1I3-229ENST00000511748 L3MBTL2Q969R5 705 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 GAS2L1Q99501 681 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-229ENST00000511748 RTL1A6NKG5 1358 aa9.45□□□□□ -0.9
NR1I3-229ENST00000511748 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms