RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	UQCRFS1P1	P0C7P4	283 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	TIMM10	P62072	90 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	ADCK5	Q3MIX3	580 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	EDC3	Q96F86	508 aa	Known RBP	11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	GREM2	Q9H772	168 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	TBC1D2B	Q9UPU7	963 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	ZDHHC9	Q9Y397	364 aa		11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	DDX49	Q9Y6V7	483 aa	Known RBP	11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	BRCA1	P38398	1863 aa	Known RBP	11.17	□□□□□ -0.62
IFT122-223	ENST00000511498	C4A	P0C0L4	1744 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	C4B	P0C0L5	1744 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	PDE8B	O95263	885 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	PDC	P20941	246 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	CTCF	P49711	727 aa	Predicted RBP	11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	MRE11	P49959	708 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	PKP1	Q13835	747 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	PUM3	Q15397	648 aa	Known RBP	11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	CSPP1	Q1MSJ5	1256 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	CCDC152	Q4G0S7	254 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	VGLL2	Q8N8G2	317 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	NEK1	Q96PY6	1258 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	LMBRD1	Q9NUN5	540 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	CTNNA3	Q9UI47	895 aa		11.16	□□□□□ -0.62
IFT122-223	ENST00000511498	MYH15	Q9Y2K3	1946 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	MAST3	O60307	1309 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	ZSCAN22	P10073	491 aa	Predicted RBP	11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	SLC5A1	P13866	664 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	ARID4A	P29374	1257 aa	Predicted RBP	11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	ITPK1	Q13572	414 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	LPIN2	Q92539	896 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	APPBP2	Q92624	585 aa		11.15	□□□□□ -0.62
IFT122-223	ENST00000511498	MAST2	Q6P0Q8	1798 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	MYH13	Q9UKX3	1938 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	STX6	O43752	255 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	NTSR2	O95665	410 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	NCL	P19338	710 aa	Known RBP	11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	RC3H1	Q5TC82	1133 aa	Known RBP	11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	SUSD4	Q5VX71	490 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	CCDC83	Q8IWF9	413 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	TMEM87A	Q8NBN3	555 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	SYAP1	Q96A49	352 aa	Predicted RBP	11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	TIAM2	Q8IVF5	1701 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	ARFGEF1	Q9Y6D6	1849 aa		11.14	□□□□□ -0.63
IFT122-223	ENST00000511498	CYP21A2	P08686	494 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	GJB2	P29033	226 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	ADORA1	P30542	326 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	IGHMBP2	P38935	993 aa	Known RBP	11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	ZNF445	P59923	1031 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	ME3	Q16798	604 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	C9orf131	Q5VYM1	1079 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	CDC5L	Q99459	802 aa	Known RBP	11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	MPHOSPH8	Q99549	860 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	GZF1	Q9H116	711 aa	Predicted RBP	11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	RRAGC	Q9HB90	399 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	KIF3A	Q9Y496	699 aa		11.13	□□□□□ -0.63
IFT122-223	ENST00000511498	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	ZMYM6	O95789	1325 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	LARGE1	O95461	756 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	F13A1	P00488	732 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	HSPD1	P10809	573 aa	Known RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	CPA1	P15085	419 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	SYT1	P21579	422 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	FGFR2	P21802	821 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	TOB2	Q14106	344 aa	Predicted RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	IMMT	Q16891	758 aa	Known RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	CCDC129	Q6ZRS4	1044 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	SEC62	Q99442	399 aa	Known RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	NYX	Q9GZU5	481 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	CCNL1	Q9UK58	526 aa	Predicted RBP	11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	TPCN1	Q9ULQ1	816 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	NDUFB9	Q9Y6M9	179 aa		11.12	□□□□□ -0.63
IFT122-223	ENST00000511498	WDR19	Q8NEZ3	1342 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	PRPF40A	O75400	957 aa	Known RBP	11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	PHF14	O94880	888 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	ADD2	P35612	726 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	MCAM	P43121	646 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	ZAP70	P43403	619 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	LBX1	P52954	281 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	UBE3C	Q15386	1083 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	DHX32	Q7L7V1	743 aa	Known RBP	11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	SYNE4	Q8N205	404 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	FBXL16	Q8N461	479 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	FLAD1	Q8NFF5	587 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	LLPH	Q9BRT6	129 aa	Known RBP	11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	AGXT2	Q9BYV1	514 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	GRPEL1	Q9HAV7	217 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	CREBZF	Q9NS37	354 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	CNTNAP1	P78357	1384 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	CARMIL3	Q8ND23	1372 aa		11.11	□□□□□ -0.63
IFT122-223	ENST00000511498	UBR3	Q6ZT12	1888 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	TCHH	Q07283	1943 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498		M0R2C6	588 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	RPS6KA4	O75676	772 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	HMGB2	P26583	209 aa	Known RBP	11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	FGD1	P98174	961 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	WASHC4	Q2M389	1173 aa		11.1	□□□□□ -0.63
IFT122-223	ENST00000511498	CCDC102B	Q68D86	513 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms