RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
COL1A1-212ENST00000510710 ZNF804AQ7Z570 1209 aa18.97■□□□□ 0.63
COL1A1-212ENST00000510710 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
COL1A1-212ENST00000510710 FZD1Q9UP38 647 aa18.97■□□□□ 0.63
COL1A1-212ENST00000510710 SALL2Q9Y467 1007 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-212ENST00000510710 CACNA1FO60840 1977 aa18.96■□□□□ 0.63
COL1A1-212ENST00000510710 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-212ENST00000510710 FOXO4P98177 505 aa18.96■□□□□ 0.63
COL1A1-212ENST00000510710 C15orf52Q6ZUT6 534 aaKnown RBP18.96■□□□□ 0.63
COL1A1-212ENST00000510710 MTMR14Q8NCE2 650 aa18.96■□□□□ 0.63
COL1A1-212ENST00000510710 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-212ENST00000510710 F6X3S4 739 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 PLIN1O60240 522 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 ALDH1A1P00352 501 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 IL1R1P14778 569 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 INHBEP58166 350 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 CFAP100Q494V2 611 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 FBXO46Q6PJ61 603 aaPredicted RBP18.95■□□□□ 0.62
COL1A1-212ENST00000510710 CFHR5Q9BXR6 569 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 R3HDMLQ9H3Y0 253 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 PCDHAC2Q9Y5I4 1007 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 PPP2R3BQ9Y5P8 575 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 IRS2Q9Y4H2 1338 aa18.95■□□□□ 0.62
COL1A1-212ENST00000510710 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-212ENST00000510710 RBM5P52756 815 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL1A1-212ENST00000510710 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
COL1A1-212ENST00000510710 MAP3K11Q16584 847 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 CCDC57Q2TAC2 916 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 SUPT20HL1Q3ZLR7 823 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 LMBR1LQ6UX01 489 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 WDR63Q8IWG1 891 aa18.94■□□□□ 0.62
COL1A1-212ENST00000510710 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 FKBP1AP62942 108 aaKnown RBP18.93■□□□□ 0.62
COL1A1-212ENST00000510710 LDHAL6AQ6ZMR3 332 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 IFNL1Q8IU54 200 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 ZNF594Q96JF6 807 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-212ENST00000510710 PRMT6Q96LA8 375 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-212ENST00000510710 VEZTQ9HBM0 779 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 CNNM1Q9NRU3 951 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
COL1A1-212ENST00000510710 SPDYE2BA6NHP3 402 aa18.92■□□□□ 0.62
COL1A1-212ENST00000510710 SPDYE6P0CI01 402 aa18.92■□□□□ 0.62
COL1A1-212ENST00000510710 ZBTB48P10074 688 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-212ENST00000510710 WNK4Q96J92 1243 aa18.92■□□□□ 0.62
COL1A1-212ENST00000510710 CLMNQ96JQ2 1002 aa18.92■□□□□ 0.62
COL1A1-212ENST00000510710 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-212ENST00000510710 PDE4DIPQ5VU43 2346 aa18.9■□□□□ 0.62
COL1A1-212ENST00000510710 UNCXA6NJT0 531 aa18.9■□□□□ 0.62
COL1A1-212ENST00000510710 GRM8O00222 908 aa18.9■□□□□ 0.62
COL1A1-212ENST00000510710 TNRC18O15417 2968 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-212ENST00000510710 IREB2P48200 963 aaKnown RBP18.9■□□□□ 0.62
COL1A1-212ENST00000510710 EPHA10Q5JZY3 1008 aa18.9■□□□□ 0.62
COL1A1-212ENST00000510710 NBPF12Q5TAG4 269 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-212ENST00000510710 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
COL1A1-212ENST00000510710 ECM29Q5VYK3 1845 aa18.9■□□□□ 0.62
COL1A1-212ENST00000510710 PCDH10Q9P2E7 1040 aa18.89■□□□□ 0.61
COL1A1-212ENST00000510710 TRIM17Q9Y577 477 aa18.89■□□□□ 0.61
COL1A1-212ENST00000510710 SSC5DA1L4H1 1573 aa18.89■□□□□ 0.61
COL1A1-212ENST00000510710 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
COL1A1-212ENST00000510710 USP2O75604 605 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-212ENST00000510710 RASA3Q14644 834 aa18.88■□□□□ 0.61
COL1A1-212ENST00000510710 OTUD7BQ6GQQ9 843 aa18.88■□□□□ 0.61
COL1A1-212ENST00000510710 IGF2BP3O00425 579 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL1A1-212ENST00000510710 AOX1Q06278 1338 aa18.87■□□□□ 0.61
COL1A1-212ENST00000510710 TNFAIP1Q13829 316 aa18.87■□□□□ 0.61
COL1A1-212ENST00000510710 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
COL1A1-212ENST00000510710 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
COL1A1-212ENST00000510710 ANKRD13AQ8IZ07 590 aa18.87■□□□□ 0.61
COL1A1-212ENST00000510710 TTF2Q9UNY4 1162 aaKnown RBP18.87■□□□□ 0.61
COL1A1-212ENST00000510710 FAM205AQ6ZU69 1335 aa18.86■□□□□ 0.61
COL1A1-212ENST00000510710 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
COL1A1-212ENST00000510710 GYG1P46976 350 aa18.86■□□□□ 0.61
COL1A1-212ENST00000510710 UBE4AQ14139 1066 aa18.86■□□□□ 0.61
COL1A1-212ENST00000510710 TDRD7Q8NHU6 1098 aaKnown RBP18.86■□□□□ 0.61
COL1A1-212ENST00000510710 ZNF70Q9UC06 446 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-212ENST00000510710 ALDH1L1O75891 902 aa18.85■□□□□ 0.61
COL1A1-212ENST00000510710 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
COL1A1-212ENST00000510710 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
COL1A1-212ENST00000510710 SRCIN1Q9C0H9 1055 aa18.85■□□□□ 0.61
COL1A1-212ENST00000510710 TDRD3Q9H7E2 651 aaKnown RBP18.85■□□□□ 0.61
COL1A1-212ENST00000510710 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-212ENST00000510710 SERPINA10Q9UK55 444 aa18.85■□□□□ 0.61
COL1A1-212ENST00000510710 GJA5P36382 358 aa18.84■□□□□ 0.61
COL1A1-212ENST00000510710 CRHR2Q13324 411 aa18.84■□□□□ 0.61
COL1A1-212ENST00000510710 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
COL1A1-212ENST00000510710 FAM84BQ96KN1 310 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-212ENST00000510710 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.6
COL1A1-212ENST00000510710 VPS37DQ86XT2 251 aa18.83■□□□□ 0.6
COL1A1-212ENST00000510710 DZIP1LQ8IYY4 767 aaKnown RBP18.83■□□□□ 0.6
COL1A1-212ENST00000510710 OPTNQ96CV9 577 aa18.83■□□□□ 0.6
COL1A1-212ENST00000510710 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
COL1A1-212ENST00000510710 ELP3Q9H9T3 547 aa18.83■□□□□ 0.6
COL1A1-212ENST00000510710 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
COL1A1-212ENST00000510710 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
COL1A1-212ENST00000510710 SUCLG2Q96I99 432 aa18.82■□□□□ 0.6
COL1A1-212ENST00000510710 PTPN18Q99952 460 aa18.82■□□□□ 0.6
COL1A1-212ENST00000510710 PTPN22Q9Y2R2 807 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms