RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 JAG2Q9Y219 1238 aa28.79■■■□□ 2.2
SNF8-209ENST00000510558 PAPPA2Q9BXP8 1791 aa28.78■■■□□ 2.2
SNF8-209ENST00000510558 HIBADHP31937 336 aaKnown RBP28.78■■■□□ 2.2
SNF8-209ENST00000510558 RGMBQ6NW40 437 aa28.78■■■□□ 2.2
SNF8-209ENST00000510558 TDRD7Q8NHU6 1098 aaKnown RBP28.78■■■□□ 2.2
SNF8-209ENST00000510558 ZBED3Q96IU2 234 aaPredicted RBP28.78■■■□□ 2.2
SNF8-209ENST00000510558 FAM84BQ96KN1 310 aaPredicted RBP28.78■■■□□ 2.2
SNF8-209ENST00000510558 PRDM10Q9NQV6 1147 aa28.78■■■□□ 2.2
SNF8-209ENST00000510558 ARAP2Q8WZ64 1704 aa28.77■■■□□ 2.2
SNF8-209ENST00000510558 FAM205AQ6ZU69 1335 aa28.77■■■□□ 2.2
SNF8-209ENST00000510558 RFX5P48382 616 aaPredicted RBP28.77■■■□□ 2.2
SNF8-209ENST00000510558 HNRNPUQ00839 825 aaKnown RBP eCLIP28.77■■■□□ 2.2
SNF8-209ENST00000510558 VGLL2Q8N8G2 317 aa28.77■■■□□ 2.2
SNF8-209ENST00000510558 ARHGAP45Q92619 1136 aa28.77■■■□□ 2.2
SNF8-209ENST00000510558 BEGAINQ9BUH8 593 aa28.77■■■□□ 2.2
SNF8-209ENST00000510558 PDE8BO95263 885 aa28.76■■■□□ 2.19
SNF8-209ENST00000510558 HSPA8P11142 646 aaKnown RBP28.76■■■□□ 2.19
SNF8-209ENST00000510558 LBX1P52954 281 aa28.76■■■□□ 2.19
SNF8-209ENST00000510558 F8W031 263 aaPredicted RBP28.75■■■□□ 2.19
SNF8-209ENST00000510558 NOGQ13253 232 aa28.75■■■□□ 2.19
SNF8-209ENST00000510558 DLGAP5Q15398 846 aa28.75■■■□□ 2.19
SNF8-209ENST00000510558 PTPN12Q05209 780 aaKnown RBP28.74■■■□□ 2.19
SNF8-209ENST00000510558 PRAMEF18Q5VWM3 479 aa28.74■■■□□ 2.19
SNF8-209ENST00000510558 APOBEC3FQ8IUX4 373 aaKnown RBP28.74■■■□□ 2.19
SNF8-209ENST00000510558 MTMR14Q8NCE2 650 aa28.74■■■□□ 2.19
SNF8-209ENST00000510558 ZNF157P51786 506 aaPredicted RBP28.73■■■□□ 2.19
SNF8-209ENST00000510558 FKBP1BP68106 108 aa28.73■■■□□ 2.19
SNF8-209ENST00000510558 FBXO33Q7Z6M2 555 aa28.73■■■□□ 2.19
SNF8-209ENST00000510558 HDAC5Q9UQL6 1122 aa28.73■■■□□ 2.19
SNF8-209ENST00000510558 FAM155AB1AL88 458 aaPredicted RBP28.72■■■□□ 2.19
SNF8-209ENST00000510558 EYA2O00167 538 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 MFSD14BQ5SR56 506 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 VPS37DQ86XT2 251 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 CCDC102AQ96A19 550 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 ZIC5Q96T25 663 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 MEIS3Q99687 375 aa28.72■■■□□ 2.19
SNF8-209ENST00000510558 LRRFIP2Q9Y608 721 aaKnown RBP28.72■■■□□ 2.19
SNF8-209ENST00000510558 CFAP100Q494V2 611 aa28.71■■■□□ 2.19
SNF8-209ENST00000510558 CAVIN4Q5BKX8 364 aa28.71■■■□□ 2.19
SNF8-209ENST00000510558 INTS3Q68E01 1043 aaKnown RBP28.71■■■□□ 2.19
SNF8-209ENST00000510558 PCDHAC2Q9Y5I4 1007 aa28.71■■■□□ 2.19
SNF8-209ENST00000510558 IPO8O15397 1037 aaKnown RBP28.7■■■□□ 2.18
SNF8-209ENST00000510558 BCAR3O75815 825 aa28.7■■■□□ 2.18
SNF8-209ENST00000510558 PUM3Q15397 648 aaKnown RBP28.7■■■□□ 2.18
SNF8-209ENST00000510558 FGFR2P21802 821 aa28.69■■■□□ 2.18
SNF8-209ENST00000510558 NF2P35240 595 aa28.69■■■□□ 2.18
SNF8-209ENST00000510558 IQSEC3Q9UPP2 1182 aaPredicted RBP28.69■■■□□ 2.18
SNF8-209ENST00000510558 COL1A1P02452 1464 aaPredicted RBP28.69■■■□□ 2.18
SNF8-209ENST00000510558 MYH13Q9UKX3 1938 aa28.69■■■□□ 2.18
SNF8-209ENST00000510558 SPDYE2BA6NHP3 402 aa28.68■■■□□ 2.18
SNF8-209ENST00000510558 SLC10A3P09131 477 aa28.68■■■□□ 2.18
SNF8-209ENST00000510558 SPDYE6P0CI01 402 aa28.68■■■□□ 2.18
SNF8-209ENST00000510558 MOB2Q70IA6 237 aa28.68■■■□□ 2.18
SNF8-209ENST00000510558 ATG9AQ7Z3C6 839 aa28.68■■■□□ 2.18
SNF8-209ENST00000510558 FRAT1Q92837 279 aaPredicted RBP28.68■■■□□ 2.18
SNF8-209ENST00000510558 CA12O43570 354 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 MYO1BO43795 1136 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 IFIT1P09914 478 aaKnown RBP28.67■■■□□ 2.18
SNF8-209ENST00000510558 TRIM27P14373 513 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 ATF7IPQ6VMQ6 1270 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 PRMT6Q96LA8 375 aaPredicted RBP28.67■■■□□ 2.18
SNF8-209ENST00000510558 SIL1Q9H173 461 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 TSKSQ9UJT2 592 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 FBXO3Q9UK99 471 aa28.67■■■□□ 2.18
SNF8-209ENST00000510558 TTF2Q9UNY4 1162 aaKnown RBP28.67■■■□□ 2.18
SNF8-209ENST00000510558 FRAT2O75474 233 aaPredicted RBP28.66■■■□□ 2.18
SNF8-209ENST00000510558 BCAMP50895 628 aa28.66■■■□□ 2.18
SNF8-209ENST00000510558 RBM5P52756 815 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNF8-209ENST00000510558 CHAF1AQ13111 956 aaPredicted RBP28.66■■■□□ 2.18
SNF8-209ENST00000510558 TNNQ9UQP3 1299 aa28.66■■■□□ 2.18
SNF8-209ENST00000510558 CLRN2A0PK11 232 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 UBE2Q2LH0YL09 131 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 CIAO1O76071 339 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 GNAI3P08754 354 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 TTLL12Q14166 644 aaPredicted RBP28.65■■■□□ 2.18
SNF8-209ENST00000510558 RASAL3Q86YV0 1011 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 DEFB129Q9H1M3 183 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 AOX1Q06278 1338 aa28.65■■■□□ 2.18
SNF8-209ENST00000510558 SLC5A1P13866 664 aa28.64■■■□□ 2.18
SNF8-209ENST00000510558 KIF23Q02241 960 aaPredicted RBP28.64■■■□□ 2.18
SNF8-209ENST00000510558 LPIN2Q92539 896 aa28.64■■■□□ 2.18
SNF8-209ENST00000510558 SERPINA10Q9UK55 444 aa28.64■■■□□ 2.18
SNF8-209ENST00000510558 AKAP11Q9UKA4 1901 aa28.64■■■□□ 2.18
SNF8-209ENST00000510558 TBC1D22AQ8WUA7 517 aa28.63■■■□□ 2.17
SNF8-209ENST00000510558 PA2G4Q9UQ80 394 aaKnown RBP28.63■■■□□ 2.17
SNF8-209ENST00000510558 GRIK5Q16478 980 aa28.62■■■□□ 2.17
SNF8-209ENST00000510558 CLUAP1Q96AJ1 413 aa28.62■■■□□ 2.17
SNF8-209ENST00000510558 VEZTQ9HBM0 779 aa28.62■■■□□ 2.17
SNF8-209ENST00000510558 CEP126Q9P2H0 1117 aa28.62■■■□□ 2.17
SNF8-209ENST00000510558 PPP2R3BQ9Y5P8 575 aa28.62■■■□□ 2.17
SNF8-209ENST00000510558 COPRSQ9NQ92 184 aa28.61■■■□□ 2.17
SNF8-209ENST00000510558 IL15P40933 162 aaPredicted RBP28.6■■■□□ 2.17
SNF8-209ENST00000510558 PRKG1Q13976 671 aa28.6■■■□□ 2.17
SNF8-209ENST00000510558 ATP2B3Q16720 1220 aa28.6■■■□□ 2.17
SNF8-209ENST00000510558 ARMC9Q7Z3E5 817 aa28.6■■■□□ 2.17
SNF8-209ENST00000510558 ZBED9Q6R2W3 1325 aa28.6■■■□□ 2.17
SNF8-209ENST00000510558 CAPN15O75808 1086 aa28.59■■■□□ 2.17
SNF8-209ENST00000510558 CRKP46108 304 aa28.59■■■□□ 2.17
SNF8-209ENST00000510558 ZKSCAN2Q63HK3 967 aa28.59■■■□□ 2.17
SNF8-209ENST00000510558 CASP8AP2Q9UKL3 1982 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms