RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 LUC7L2Q9Y383 392 aaKnown RBP11.98□□□□□ -0.49
NEK1-206ENST00000510533 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 CNGA4Q8IV77 575 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 EIF4A2Q14240 407 aaKnown RBP11.98□□□□□ -0.49
NEK1-206ENST00000510533 GSTA5Q7RTV2 222 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
NEK1-206ENST00000510533 RFC4P35249 363 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 CHRNA2Q15822 529 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 MYL5Q02045 173 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 IQUBQ8NA54 791 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 NUP160Q12769 1436 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 SOS1Q07889 1333 aaPredicted RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 ST5P78524 1137 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 TSPYL6Q8N831 410 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 IFT81Q8WYA0 676 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 ZEB2O60315 1214 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 SEC24BO95487 1268 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 MCM7P33993 719 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 HDXQ7Z353 690 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 RRP36Q96EU6 259 aaKnown RBP11.97□□□□□ -0.49
NEK1-206ENST00000510533 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 ELP1O95163 1332 aa11.97□□□□□ -0.49
NEK1-206ENST00000510533 PABPN1LA6NDY0 278 aaKnown RBP11.96□□□□□ -0.49
NEK1-206ENST00000510533 TNNC1P63316 161 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 ZBTB16Q05516 673 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
NEK1-206ENST00000510533 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 SMC6Q96SB8 1091 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 AKR1B15C9JRZ8 316 aaPredicted RBP11.96□□□□□ -0.49
NEK1-206ENST00000510533 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
NEK1-206ENST00000510533 GJC1P36383 396 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 TSGA10Q9BZW7 698 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 DTHD1Q6ZMT9 781 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 IMPG2Q9BZV3 1241 aa11.96□□□□□ -0.49
NEK1-206ENST00000510533 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 CEBPAP49715 358 aaPredicted RBP11.96□□□□□ -0.5
NEK1-206ENST00000510533 FAM76AQ8TAV0 307 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 LRRC45Q96CN5 670 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 ERO1AQ96HE7 468 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 PSMD1Q99460 953 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 POLKQ9UBT6 870 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 MTRF1LQ9UGC7 380 aaKnown RBP11.96□□□□□ -0.5
NEK1-206ENST00000510533 FAM13AO94988 1023 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 TFCP2Q12800 502 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 HS2ST1Q7LGA3 356 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.5
NEK1-206ENST00000510533 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 GNA11P29992 359 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 TNNI2P48788 182 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 EVCP57679 992 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 TTC31Q49AM3 519 aaPredicted RBP11.95□□□□□ -0.5
NEK1-206ENST00000510533 DNAJC21Q5F1R6 531 aaKnown RBP11.95□□□□□ -0.5
NEK1-206ENST00000510533 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 CCDC50Q8IVM0 306 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.56e-7■□□□□ 8.9
NEK1-206ENST00000510533 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 RBSNQ9H1K0 784 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 PLCB3Q01970 1234 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 PPP2R3AQ06190 1150 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
NEK1-206ENST00000510533 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
NEK1-206ENST00000510533 PICALMQ13492 652 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 MAGEB6Q8N7X4 407 aa11.95□□□□□ -0.5
NEK1-206ENST00000510533 FANCAO15360 1455 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 DENND4BO75064 1496 aaPredicted RBP11.94□□□□□ -0.5
NEK1-206ENST00000510533 TLDC2A0PJX2 215 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 SMIM23A6NLE4 172 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 CCDC63Q8NA47 563 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 CCDC114Q96M63 670 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 KDM5BQ9UGL1 1544 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 RXRAP19793 462 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 SAMD15Q9P1V8 674 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 ZNF804AQ7Z570 1209 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
NEK1-206ENST00000510533 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
NEK1-206ENST00000510533 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 GTF3C6Q969F1 213 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
NEK1-206ENST00000510533 RPS6KB1P23443 525 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
NEK1-206ENST00000510533 MAPKBP1O60336 1514 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms