RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ATG9AQ7Z3C6 839 aa26.52■■□□□ 1.84
UBE2D3-229ENST00000510129 MXD3Q9BW11 206 aa26.52■■□□□ 1.84
UBE2D3-229ENST00000510129 MKRN1Q9UHC7 482 aaKnown RBP26.52■■□□□ 1.84
UBE2D3-229ENST00000510129 CEP350Q5VT06 3117 aa26.52■■□□□ 1.84
UBE2D3-229ENST00000510129 FGFR2P21802 821 aa26.51■■□□□ 1.83
UBE2D3-229ENST00000510129 HHIPL1Q96JK4 782 aa26.51■■□□□ 1.83
UBE2D3-229ENST00000510129 TLL2Q9Y6L7 1015 aa26.51■■□□□ 1.83
UBE2D3-229ENST00000510129 FRAT2O75474 233 aaPredicted RBP26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 ECE1P42892 770 aa26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 ANGEL2Q5VTE6 544 aaKnown RBP26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 TBC1D22AQ8WUA7 517 aa26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 SIL1Q9H173 461 aa26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 TNNQ9UQP3 1299 aa26.5■■□□□ 1.83
UBE2D3-229ENST00000510129 ITPRIPQ8IWB1 547 aa26.49■■□□□ 1.83
UBE2D3-229ENST00000510129 WNT10BO00744 389 aa26.48■■□□□ 1.83
UBE2D3-229ENST00000510129 DLGAP5Q15398 846 aa26.48■■□□□ 1.83
UBE2D3-229ENST00000510129 MFSD14BQ5SR56 506 aa26.48■■□□□ 1.83
UBE2D3-229ENST00000510129 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
UBE2D3-229ENST00000510129 ZNF408Q9H9D4 720 aa26.48■■□□□ 1.83
UBE2D3-229ENST00000510129 MYO1BO43795 1136 aa26.47■■□□□ 1.83
UBE2D3-229ENST00000510129 FMR1Q06787 632 aaKnown RBP eCLIP26.47■■□□□ 1.83
UBE2D3-229ENST00000510129 ATP2B3Q16720 1220 aa26.47■■□□□ 1.83
UBE2D3-229ENST00000510129 CERS5Q8N5B7 392 aa26.47■■□□□ 1.83
UBE2D3-229ENST00000510129 SAPCD2Q86UD0 394 aa26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 APOBEC3FQ8IUX4 373 aaKnown RBP26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 C2orf69Q8N8R5 385 aa26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 GNL3LQ9NVN8 582 aaKnown RBP26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 RCAN3Q9UKA8 241 aa26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 AKAP2Q9Y2D5 859 aa26.46■■□□□ 1.83
UBE2D3-229ENST00000510129 ADM5C9JUS6 153 aa26.45■■□□□ 1.82
UBE2D3-229ENST00000510129 VEGFBP49765 207 aa26.45■■□□□ 1.82
UBE2D3-229ENST00000510129 NBPF9Q3BBW0 867 aa26.45■■□□□ 1.82
UBE2D3-229ENST00000510129 ARAP2Q8WZ64 1704 aa26.45■■□□□ 1.82
UBE2D3-229ENST00000510129 POLR2AP24928 1970 aaKnown RBP26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 BCAMP50895 628 aa26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 ZBED3Q96IU2 234 aaPredicted RBP26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 CHMP4BQ9H444 224 aaKnown RBP26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 SERPINA10Q9UK55 444 aa26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 PA2G4Q9UQ80 394 aaKnown RBP26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 SUGT1Q9Y2Z0 365 aa26.44■■□□□ 1.82
UBE2D3-229ENST00000510129 ASTN2O75129 1339 aaPredicted RBP26.43■■□□□ 1.82
UBE2D3-229ENST00000510129 FKBP1BP68106 108 aa26.43■■□□□ 1.82
UBE2D3-229ENST00000510129 CDCA5Q96FF9 252 aa26.43■■□□□ 1.82
UBE2D3-229ENST00000510129 GBA2Q9HCG7 927 aaPredicted RBP26.43■■□□□ 1.82
UBE2D3-229ENST00000510129 WDR33Q9C0J8 1336 aaKnown RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 F8W031 263 aaPredicted RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 SEMA3EO15041 775 aa26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 ZBTB7BO15156 539 aaPredicted RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 ZBTB22O15209 634 aa26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 RLBP1P12271 317 aa26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 PAXIP1Q6ZW49 1069 aaPredicted RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 TTF2Q9UNY4 1162 aaKnown RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 JAG2Q9Y219 1238 aa26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 COL1A1P02452 1464 aaPredicted RBP26.42■■□□□ 1.82
UBE2D3-229ENST00000510129 MAST3O60307 1309 aa26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 NF2P35240 595 aa26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 HDLBPQ00341 1268 aaKnown RBP26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 G3BP1Q13283 466 aaKnown RBP eCLIP26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 WDR66Q8TBY9 1149 aa26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 CAPNS2Q96L46 248 aa26.41■■□□□ 1.82
UBE2D3-229ENST00000510129 SPDYE2BA6NHP3 402 aa26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 SPDYE6P0CI01 402 aa26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 RBM5P52756 815 aaKnown RBP eCLIP26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 ATP8B2P98198 1209 aa26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 CHAF1AQ13111 956 aaPredicted RBP26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 CFAP100Q494V2 611 aa26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 PPP2R3BQ9Y5P8 575 aa26.4■■□□□ 1.82
UBE2D3-229ENST00000510129 MRIQ9BWK5 157 aa26.39■■□□□ 1.82
UBE2D3-229ENST00000510129 IQSEC3Q9UPP2 1182 aaPredicted RBP26.39■■□□□ 1.82
UBE2D3-229ENST00000510129 ECM29Q5VYK3 1845 aa26.39■■□□□ 1.81
UBE2D3-229ENST00000510129 PNMA6EA0A0J9YXQ4 647 aa26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 MAP2K2P36507 400 aa26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 HUNKP57058 714 aa26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 MAP2K1Q02750 393 aaPredicted RBP26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 POLA2Q14181 598 aa26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 SSH3Q8TE77 659 aa26.38■■□□□ 1.81
UBE2D3-229ENST00000510129 DENND2AQ9ULE3 1009 aa26.37■■□□□ 1.81
UBE2D3-229ENST00000510129 DDX19BQ9UMR2 479 aa26.37■■□□□ 1.81
UBE2D3-229ENST00000510129 MYH13Q9UKX3 1938 aa26.37■■□□□ 1.81
UBE2D3-229ENST00000510129 TFCP2Q12800 502 aa26.36■■□□□ 1.81
UBE2D3-229ENST00000510129 TNFAIP1Q13829 316 aa26.36■■□□□ 1.81
UBE2D3-229ENST00000510129 MVPQ14764 893 aaKnown RBP26.36■■□□□ 1.81
UBE2D3-229ENST00000510129 PANK1Q8TE04 598 aa26.36■■□□□ 1.81
UBE2D3-229ENST00000510129 AIDAQ96BJ3 306 aa26.36■■□□□ 1.81
UBE2D3-229ENST00000510129 A0A1B0GUL7 405 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 HSPA1AP0DMV8 641 aaKnown RBP26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 HSPA1BP0DMV9 641 aaKnown RBP26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 CYP4F22Q6NT55 531 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 ZGPATQ8N5A5 531 aaKnown RBP26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 TEKT1Q969V4 418 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 CCDC102AQ96A19 550 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 PRMT6Q96LA8 375 aaPredicted RBP26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 PAPPA2Q9BXP8 1791 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 THSD7BQ9C0I4 1608 aa26.35■■□□□ 1.81
UBE2D3-229ENST00000510129 RGMBQ6NW40 437 aa26.34■■□□□ 1.81
UBE2D3-229ENST00000510129 PDS5AQ29RF7 1337 aaKnown RBP26.34■■□□□ 1.81
UBE2D3-229ENST00000510129 CRKP46108 304 aa26.33■■□□□ 1.81
UBE2D3-229ENST00000510129 NOGQ13253 232 aa26.33■■□□□ 1.81
UBE2D3-229ENST00000510129 OS9Q13438 667 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms