RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 OSGEPQ9NPF4 335 aa9.5□□□□□ -0.89
SSBP2-214ENST00000510060 DCTN4Q9UJW0 460 aa9.5□□□□□ -0.89
SSBP2-214ENST00000510060 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
SSBP2-214ENST00000510060 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
SSBP2-214ENST00000510060 TXNDC11Q6PKC3 985 aa9.49□□□□□ -0.89
SSBP2-214ENST00000510060 ALKBH8Q96BT7 664 aaKnown RBP9.49□□□□□ -0.89
SSBP2-214ENST00000510060 NOS3P29474 1203 aa9.48□□□□□ -0.89
SSBP2-214ENST00000510060 CDC25BP30305 580 aa9.48□□□□□ -0.89
SSBP2-214ENST00000510060 IREB2P48200 963 aaKnown RBP9.48□□□□□ -0.89
SSBP2-214ENST00000510060 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
SSBP2-214ENST00000510060 PEAR1Q5VY43 1037 aaPredicted RBP9.48□□□□□ -0.89
SSBP2-214ENST00000510060 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
SSBP2-214ENST00000510060 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
SSBP2-214ENST00000510060 IVNS1ABPQ9Y6Y0 642 aa9.48□□□□□ -0.89
SSBP2-214ENST00000510060 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-214ENST00000510060 TRPA1O75762 1119 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 POLR3DP05423 398 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-214ENST00000510060 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 H2AFB2P0C5Z0 115 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 ASAP3Q8TDY4 903 aa9.47□□□□□ -0.89
SSBP2-214ENST00000510060 GPR182O15218 404 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 ORC1Q13415 861 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 IKBKEQ14164 716 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 RSPO4Q2I0M5 234 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-214ENST00000510060 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.9
SSBP2-214ENST00000510060 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-214ENST00000510060 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 LATS2Q9NRM7 1088 aa9.46□□□□□ -0.9
SSBP2-214ENST00000510060 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
SSBP2-214ENST00000510060 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-214ENST00000510060 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
SSBP2-214ENST00000510060 KIAA0319Q5VV43 1072 aa9.45□□□□□ -0.9
SSBP2-214ENST00000510060 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-214ENST00000510060 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
SSBP2-214ENST00000510060 LIN7BQ9HAP6 207 aa9.45□□□□□ -0.9
SSBP2-214ENST00000510060 A0A1W2PP55 124 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
SSBP2-214ENST00000510060 IGHA2P01877 340 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 MAPK1P28482 360 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 DUOXA2Q1HG44 320 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 Q6ZS46 218 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 ACAD11Q709F0 780 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 CCNJLQ8IV13 435 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 SLC7A3Q8WY07 619 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 KLHDC7BQ96G42 594 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 CEP41Q9BYV8 373 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 SEMA6BQ9H3T3 888 aa9.44□□□□□ -0.9
SSBP2-214ENST00000510060 SOX17Q9H6I2 414 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-214ENST00000510060 ZNF608Q9ULD9 1512 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-214ENST00000510060 DYRK3O43781 588 aa9.43□□□□□ -0.9
SSBP2-214ENST00000510060 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
SSBP2-214ENST00000510060 TMC7Q7Z402 723 aa9.43□□□□□ -0.9
SSBP2-214ENST00000510060 VN1R5Q7Z5H4 357 aa9.43□□□□□ -0.9
SSBP2-214ENST00000510060 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
SSBP2-214ENST00000510060 TM4SF5O14894 197 aa9.42□□□□□ -0.9
SSBP2-214ENST00000510060 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
SSBP2-214ENST00000510060 ZSCAN29Q8IWY8 852 aaPredicted RBP9.42□□□□□ -0.9
SSBP2-214ENST00000510060 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
SSBP2-214ENST00000510060 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
SSBP2-214ENST00000510060 EHD4Q9H223 541 aa9.42□□□□□ -0.9
SSBP2-214ENST00000510060 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
SSBP2-214ENST00000510060 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-214ENST00000510060 A0A096LPE4 126 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 A0A1W2PPZ6 126 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 GLB1P16278 677 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-214ENST00000510060 CCDC74AQ96AQ1 378 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 TCF12Q99081 682 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 CLEC4MQ9H2X3 399 aaPredicted RBP9.41□□□□□ -0.9
SSBP2-214ENST00000510060 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
SSBP2-214ENST00000510060 ALX3O95076 343 aa9.4□□□□□ -0.9
SSBP2-214ENST00000510060 KCNK4Q9NYG8 393 aa9.4□□□□□ -0.9
SSBP2-214ENST00000510060 SOX1O00570 391 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-214ENST00000510060 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-214ENST00000510060 WISP1O95388 367 aa9.39□□□□□ -0.91
SSBP2-214ENST00000510060 ESRRAP11474 423 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-214ENST00000510060 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
SSBP2-214ENST00000510060 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
SSBP2-214ENST00000510060 DDX54Q8TDD1 881 aaKnown RBP9.39□□□□□ -0.91
SSBP2-214ENST00000510060 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
SSBP2-214ENST00000510060 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 TREHO43280 583 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 ADAM11O75078 769 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 NLRP12P59046 1061 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
SSBP2-214ENST00000510060 PCDH1Q08174 1060 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
SSBP2-214ENST00000510060 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 NLRP2Q9NX02 1062 aa9.38□□□□□ -0.91
SSBP2-214ENST00000510060 DDX3YO15523 660 aaKnown RBP9.37□□□□□ -0.91
SSBP2-214ENST00000510060 GRIA4P48058 902 aa9.37□□□□□ -0.91
SSBP2-214ENST00000510060 HP1BP3Q5SSJ5 553 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-214ENST00000510060 ANKRD34AQ69YU3 496 aa9.37□□□□□ -0.91
SSBP2-214ENST00000510060 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms