RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 SRGAP3O43295 1099 aa20■□□□□ 0.79
NDFIP1-204ENST00000509436 RABL6Q3YEC7 729 aaPredicted RBP20■□□□□ 0.79
NDFIP1-204ENST00000509436 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
NDFIP1-204ENST00000509436 SIRT2Q8IXJ6 389 aa20■□□□□ 0.79
NDFIP1-204ENST00000509436 SLC17A8Q8NDX2 589 aa20■□□□□ 0.79
NDFIP1-204ENST00000509436 ASTN2O75129 1339 aaPredicted RBP20■□□□□ 0.79
NDFIP1-204ENST00000509436 IGHDP01880 384 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 FOXO4P98177 505 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 KIF4BQ2VIQ3 1234 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 OTUD5Q96G74 571 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 R3HDMLQ9H3Y0 253 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 CHMP3Q9Y3E7 222 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 TAF1P21675 1872 aa19.99■□□□□ 0.79
NDFIP1-204ENST00000509436 RTL9Q8NET4 1388 aa19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 PNMA6EA0A0J9YXQ4 647 aa19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 CTSWP56202 376 aa19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 RBM26Q5T8P6 1007 aaKnown RBP19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 LMBR1LQ6UX01 489 aa19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
NDFIP1-204ENST00000509436 EN2P19622 333 aaPredicted RBP19.97■□□□□ 0.79
NDFIP1-204ENST00000509436 POLA2Q14181 598 aa19.97■□□□□ 0.79
NDFIP1-204ENST00000509436 SCN9AQ15858 1988 aa19.96■□□□□ 0.79
NDFIP1-204ENST00000509436 HCLS1P14317 486 aaPredicted RBP19.96■□□□□ 0.79
NDFIP1-204ENST00000509436 LAMB1P07942 1786 aa19.95■□□□□ 0.78
NDFIP1-204ENST00000509436 CSF1RP07333 972 aa19.95■□□□□ 0.78
NDFIP1-204ENST00000509436 MOB2Q70IA6 237 aa19.95■□□□□ 0.78
NDFIP1-204ENST00000509436 OTOP1Q7RTM1 612 aa19.95■□□□□ 0.78
NDFIP1-204ENST00000509436 ARMC5Q96C12 935 aa19.95■□□□□ 0.78
NDFIP1-204ENST00000509436 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
NDFIP1-204ENST00000509436 TTLL11Q8NHH1 800 aa19.94■□□□□ 0.78
NDFIP1-204ENST00000509436 DCTPP1Q9H773 170 aa19.94■□□□□ 0.78
NDFIP1-204ENST00000509436 DBNDD1Q9H9R9 158 aa19.94■□□□□ 0.78
NDFIP1-204ENST00000509436 TRIM17Q9Y577 477 aa19.94■□□□□ 0.78
NDFIP1-204ENST00000509436 ZNF609O15014 1411 aa19.93■□□□□ 0.78
NDFIP1-204ENST00000509436 CCDC57Q2TAC2 916 aa19.93■□□□□ 0.78
NDFIP1-204ENST00000509436 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
NDFIP1-204ENST00000509436 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
NDFIP1-204ENST00000509436 KCNQ5Q9NR82 932 aa19.93■□□□□ 0.78
NDFIP1-204ENST00000509436 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 SREBF2Q12772 1141 aa19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 IFIT5Q13325 482 aaKnown RBP19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 GRAPQ13588 217 aa19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 WASHC4Q2M389 1173 aa19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 ANGEL2Q5VTE6 544 aaKnown RBP19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 GRAPLQ8TC17 118 aaPredicted RBP19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 PSME4Q14997 1843 aa19.92■□□□□ 0.78
NDFIP1-204ENST00000509436 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 H0YGN5 161 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 SURF6O75683 361 aaKnown RBP19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 ZNF280AP59817 542 aaPredicted RBP19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 SF3B3Q15393 1217 aaKnown RBP19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 TMC4Q7Z404 712 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 CCDC85AQ96PX6 553 aaPredicted RBP19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 PTPN22Q9Y2R2 807 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 PITPNM2Q9BZ72 1349 aa19.91■□□□□ 0.78
NDFIP1-204ENST00000509436 SPEF2Q9C093 1822 aa19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 ECE2O60344 883 aa19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 ITGA6P23229 1130 aa19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 G3BP1Q13283 466 aaKnown RBP eCLIP19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 SCARF1Q14162 830 aa19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 GREM2Q9H772 168 aa19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 NOP58Q9Y2X3 529 aaKnown RBP19.9■□□□□ 0.78
NDFIP1-204ENST00000509436 RAB11FIP3O75154 756 aa19.89■□□□□ 0.77
NDFIP1-204ENST00000509436 VIL1P09327 827 aaKnown RBP19.89■□□□□ 0.77
NDFIP1-204ENST00000509436 ERC1Q8IUD2 1116 aa19.89■□□□□ 0.77
NDFIP1-204ENST00000509436 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.77
NDFIP1-204ENST00000509436 LAMA3Q16787 3333 aa19.88■□□□□ 0.77
NDFIP1-204ENST00000509436 PTPN12Q05209 780 aaKnown RBP19.88■□□□□ 0.77
NDFIP1-204ENST00000509436 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
NDFIP1-204ENST00000509436 PA2G4Q9UQ80 394 aaKnown RBP19.88■□□□□ 0.77
NDFIP1-204ENST00000509436 ALDH1A1P00352 501 aa19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 MNX1P50219 401 aaPredicted RBP19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 CDC5LQ99459 802 aaKnown RBP19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 POLLQ9UGP5 575 aa19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 FBXO3Q9UK99 471 aa19.87■□□□□ 0.77
NDFIP1-204ENST00000509436 RIMBP2O15034 1052 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 MKRN3Q13064 507 aaKnown RBP19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 CHRDL2Q6WN34 429 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 KLHDC4Q8TBB5 520 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 SIL1Q9H173 461 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 RBM27Q9P2N5 1060 aaKnown RBP19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 COL4A1P02462 1669 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
NDFIP1-204ENST00000509436 APBB1O00213 710 aa19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 IGHMBP2P38935 993 aaKnown RBP19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 NUCB1Q02818 461 aa19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 DOK7Q18PE1 504 aa19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 KIF1BPQ96EK5 621 aa19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 LRRCC1Q9C099 1032 aa19.85■□□□□ 0.77
NDFIP1-204ENST00000509436 EYA2O00167 538 aa19.84■□□□□ 0.77
NDFIP1-204ENST00000509436 CIAO1O76071 339 aa19.84■□□□□ 0.77
NDFIP1-204ENST00000509436 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
NDFIP1-204ENST00000509436 ZNF333Q96JL9 665 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms