RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
RFC1-211ENST00000509084 MCAMP43121 646 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 GYG1P46976 350 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 BCAMP50895 628 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 PSMD1Q99460 953 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
RFC1-211ENST00000509084 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 POLLQ9UGP5 575 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFC1-211ENST00000509084 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 WASHC4Q2M389 1173 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 KBTBD3Q8NAB2 608 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 FHDC1Q9C0D6 1143 aaPredicted RBP12.58□□□□□ -0.4
RFC1-211ENST00000509084 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 AKAP11Q9UKA4 1901 aa12.58□□□□□ -0.4
RFC1-211ENST00000509084 GOLIM4O00461 696 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
RFC1-211ENST00000509084 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
RFC1-211ENST00000509084 KLRK1P26718 216 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 ZAP70P43403 619 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 SCARF1Q14162 830 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 TMED8Q6PL24 325 aaPredicted RBP12.57□□□□□ -0.4
RFC1-211ENST00000509084 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
RFC1-211ENST00000509084 RUFY2Q8WXA3 655 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.4
RFC1-211ENST00000509084 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
RFC1-211ENST00000509084 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 G3V3G9 751 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 IL1R1P14778 569 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 SLC51AQ86UW1 340 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
RFC1-211ENST00000509084 WDR66Q8TBY9 1149 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 RAD50Q92878 1312 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 LTBP3Q9NS15 1303 aa12.56□□□□□ -0.4
RFC1-211ENST00000509084 WTIPA6NIX2 430 aaPredicted RBP12.55□□□□□ -0.4
RFC1-211ENST00000509084 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 PODNQ7Z5L7 613 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 NLGN2Q8NFZ4 835 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 TBC1D22AQ8WUA7 517 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 MAST2Q6P0Q8 1798 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
RFC1-211ENST00000509084 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 HAX1O00165 279 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 CYP2E1P05181 493 aaPredicted RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 CHMLP26374 656 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 PI16Q6UXB8 463 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
RFC1-211ENST00000509084 MYH7P12883 1935 aa12.54□□□□□ -0.4
RFC1-211ENST00000509084 REC8O95072 547 aa12.53□□□□□ -0.4
RFC1-211ENST00000509084 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
RFC1-211ENST00000509084 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
RFC1-211ENST00000509084 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
RFC1-211ENST00000509084 FAM205AQ6ZU69 1335 aa12.53□□□□□ -0.4
RFC1-211ENST00000509084 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 UBE3CQ15386 1083 aa12.52□□□□□ -0.41
RFC1-211ENST00000509084 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.41
RFC1-211ENST00000509084 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
RFC1-211ENST00000509084 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.41
RFC1-211ENST00000509084 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
RFC1-211ENST00000509084 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.41
RFC1-211ENST00000509084 ECE2O60344 883 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 ADD2P35612 726 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
RFC1-211ENST00000509084 FKBP1AP62942 108 aaKnown RBP12.51□□□□□ -0.41
RFC1-211ENST00000509084 AOC3Q16853 763 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 APPBP2Q92624 585 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 HELLSQ9NRZ9 838 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 ABCF2Q9UG63 623 aa12.51□□□□□ -0.41
RFC1-211ENST00000509084 NFKBIEO00221 500 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 SGSM2O43147 1006 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms