RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 IL15P40933 162 aaPredicted RBP22.63■■□□□ 1.21
CLDND1-220ENST00000508902 SSH3Q8TE77 659 aa22.63■■□□□ 1.21
CLDND1-220ENST00000508902 ECM29Q5VYK3 1845 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 ADORA1P30542 326 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 ATP8B2P98198 1209 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 CEP85Q6P2H3 762 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 KIAA0825Q8IV33 1275 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 ZBED3Q96IU2 234 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-220ENST00000508902 MYOZ2Q9NPC6 264 aa22.62■■□□□ 1.21
CLDND1-220ENST00000508902 SASH1O94885 1247 aa22.61■■□□□ 1.21
CLDND1-220ENST00000508902 TFCP2Q12800 502 aa22.61■■□□□ 1.21
CLDND1-220ENST00000508902 ATP2B3Q16720 1220 aa22.61■■□□□ 1.21
CLDND1-220ENST00000508902 ZC3H15Q8WU90 426 aaKnown RBP22.61■■□□□ 1.21
CLDND1-220ENST00000508902 LPIN2Q92539 896 aa22.61■■□□□ 1.21
CLDND1-220ENST00000508902 MYO3BQ8WXR4 1341 aa22.6■■□□□ 1.21
CLDND1-220ENST00000508902 NBPF9Q3BBW0 867 aa22.6■■□□□ 1.21
CLDND1-220ENST00000508902 GGA3Q9NZ52 723 aa22.6■■□□□ 1.21
CLDND1-220ENST00000508902 CEP126Q9P2H0 1117 aa22.6■■□□□ 1.21
CLDND1-220ENST00000508902 SCAF8Q9UPN6 1271 aaKnown RBP22.6■■□□□ 1.21
CLDND1-220ENST00000508902 ADM5C9JUS6 153 aa22.59■■□□□ 1.21
CLDND1-220ENST00000508902 CST9Q5W186 159 aa22.59■■□□□ 1.21
CLDND1-220ENST00000508902 ZBTB40Q9NUA8 1239 aa22.59■■□□□ 1.21
CLDND1-220ENST00000508902 SLC5A1P13866 664 aa22.58■■□□□ 1.21
CLDND1-220ENST00000508902 FKBP1AP62942 108 aaKnown RBP22.58■■□□□ 1.21
CLDND1-220ENST00000508902 SCARF1Q14162 830 aa22.58■■□□□ 1.21
CLDND1-220ENST00000508902 SIRT2Q8IXJ6 389 aa22.58■■□□□ 1.21
CLDND1-220ENST00000508902 WNT10BO00744 389 aa22.57■■□□□ 1.2
CLDND1-220ENST00000508902 IFIT1P09914 478 aaKnown RBP22.57■■□□□ 1.2
CLDND1-220ENST00000508902 PHKA1P46020 1223 aa22.57■■□□□ 1.2
CLDND1-220ENST00000508902 TIMM10P62072 90 aa22.57■■□□□ 1.2
CLDND1-220ENST00000508902 USP48Q86UV5 1035 aa22.57■■□□□ 1.2
CLDND1-220ENST00000508902 CREBZFQ9NS37 354 aa22.57■■□□□ 1.2
CLDND1-220ENST00000508902 F8W031 263 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-220ENST00000508902 CHAF1AQ13111 956 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-220ENST00000508902 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
CLDND1-220ENST00000508902 MFSD14BQ5SR56 506 aa22.56■■□□□ 1.2
CLDND1-220ENST00000508902 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
CLDND1-220ENST00000508902 A0A1B0GUL7 405 aa22.55■■□□□ 1.2
CLDND1-220ENST00000508902 DDX19BQ9UMR2 479 aa22.55■■□□□ 1.2
CLDND1-220ENST00000508902 NOP58Q9Y2X3 529 aaKnown RBP22.55■■□□□ 1.2
CLDND1-220ENST00000508902 TMEM88BA6NKF7 163 aa22.54■■□□□ 1.2
CLDND1-220ENST00000508902 MS4A1P11836 297 aa22.54■■□□□ 1.2
CLDND1-220ENST00000508902 CAVIN4Q5BKX8 364 aa22.54■■□□□ 1.2
CLDND1-220ENST00000508902 KLRG1Q96E93 195 aa22.54■■□□□ 1.2
CLDND1-220ENST00000508902 AKAP11Q9UKA4 1901 aa22.53■■□□□ 1.2
CLDND1-220ENST00000508902 CDC37L1Q7L3B6 337 aa22.53■■□□□ 1.2
CLDND1-220ENST00000508902 KRT26Q7Z3Y9 468 aa22.53■■□□□ 1.2
CLDND1-220ENST00000508902 VPS37DQ86XT2 251 aa22.53■■□□□ 1.2
CLDND1-220ENST00000508902 RRP1P56182 461 aaKnown RBP22.52■■□□□ 1.2
CLDND1-220ENST00000508902 CCDC102BQ68D86 513 aa22.52■■□□□ 1.2
CLDND1-220ENST00000508902 MTMR14Q8NCE2 650 aa22.52■■□□□ 1.2
CLDND1-220ENST00000508902 XAGE2Q96GT9 111 aa22.52■■□□□ 1.2
CLDND1-220ENST00000508902 CNTNAP1P78357 1384 aa22.51■■□□□ 1.19
CLDND1-220ENST00000508902 CFAP100Q494V2 611 aa22.51■■□□□ 1.19
CLDND1-220ENST00000508902 OGFOD1Q8N543 542 aa22.51■■□□□ 1.19
CLDND1-220ENST00000508902 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
CLDND1-220ENST00000508902 PITPNM2Q9BZ72 1349 aa22.51■■□□□ 1.19
CLDND1-220ENST00000508902 THSD7BQ9C0I4 1608 aa22.5■■□□□ 1.19
CLDND1-220ENST00000508902 SURF6O75683 361 aaKnown RBP22.5■■□□□ 1.19
CLDND1-220ENST00000508902 CELF2O95319 508 aaKnown RBP22.5■■□□□ 1.19
CLDND1-220ENST00000508902 G3BP1Q13283 466 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLDND1-220ENST00000508902 RASGRF1Q13972 1273 aa22.5■■□□□ 1.19
CLDND1-220ENST00000508902 PRMT6Q96LA8 375 aaPredicted RBP22.5■■□□□ 1.19
CLDND1-220ENST00000508902 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
CLDND1-220ENST00000508902 SPDYE2BA6NHP3 402 aa22.49■■□□□ 1.19
CLDND1-220ENST00000508902 ZBTB22O15209 634 aa22.49■■□□□ 1.19
CLDND1-220ENST00000508902 SPDYE6P0CI01 402 aa22.49■■□□□ 1.19
CLDND1-220ENST00000508902 PRAMEF18Q5VWM3 479 aa22.49■■□□□ 1.19
CLDND1-220ENST00000508902 DCPSQ96C86 337 aaKnown RBP22.49■■□□□ 1.19
CLDND1-220ENST00000508902 TTF2Q9UNY4 1162 aaKnown RBP22.49■■□□□ 1.19
CLDND1-220ENST00000508902 MYO5AQ9Y4I1 1855 aaKnown RBP22.49■■□□□ 1.19
CLDND1-220ENST00000508902 SSC5DA1L4H1 1573 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 TNNI3KQ59H18 835 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 PI16Q6UXB8 463 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 CDCA5Q96FF9 252 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 ZNF408Q9H9D4 720 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 TLR7Q9NYK1 1049 aaKnown RBP22.48■■□□□ 1.19
CLDND1-220ENST00000508902 HDAC9Q9UKV0 1011 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 FPGT-TNNI3KV9GXZ4 949 aa22.48■■□□□ 1.19
CLDND1-220ENST00000508902 RASSF10A6NK89 507 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 PRDX5P30044 214 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 MMP14P50281 582 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 JMYQ8N9B5 988 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
CLDND1-220ENST00000508902 DBNDD2Q9BQY9 259 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
CLDND1-220ENST00000508902 CLRN2A0PK11 232 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 FRAT2O75474 233 aaPredicted RBP22.46■■□□□ 1.19
CLDND1-220ENST00000508902 CRKP46108 304 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 DLGAP5Q15398 846 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 SULF1Q8IWU6 871 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 TBC1D22AQ8WUA7 517 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 GPR108Q9NPR9 543 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 AKAP2Q9Y2D5 859 aa22.46■■□□□ 1.19
CLDND1-220ENST00000508902 MYH2Q9UKX2 1941 aa22.45■■□□□ 1.18
CLDND1-220ENST00000508902 SAPCD2Q86UD0 394 aa22.45■■□□□ 1.18
CLDND1-220ENST00000508902 EAF2Q96CJ1 260 aaPredicted RBP22.45■■□□□ 1.18
CLDND1-220ENST00000508902 NEUROD6Q96NK8 337 aa22.45■■□□□ 1.18
CLDND1-220ENST00000508902 SERPINA10Q9UK55 444 aa22.45■■□□□ 1.18
CLDND1-220ENST00000508902 ARID4AP29374 1257 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms