RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ZNF417Q8TAU3 575 aa9.87□□□□□ -0.83
GYPB-210ENST00000508841 ASAP3Q8TDY4 903 aa9.87□□□□□ -0.83
GYPB-210ENST00000508841 NUDT8Q8WV74 236 aa9.87□□□□□ -0.83
GYPB-210ENST00000508841 ZNF587Q96SQ5 575 aaPredicted RBP9.87□□□□□ -0.83
GYPB-210ENST00000508841 SHISA8B8ZZ34 492 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 RECKO95980 971 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 CDC27P30260 824 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 ST13P50502 369 aaKnown RBP9.86□□□□□ -0.83
GYPB-210ENST00000508841 TSNAXIP1Q2TAA8 658 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 PODNQ7Z5L7 613 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 NEDD1Q8NHV4 660 aa9.86□□□□□ -0.83
GYPB-210ENST00000508841 TRPA1O75762 1119 aa9.85□□□□□ -0.83
GYPB-210ENST00000508841 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
GYPB-210ENST00000508841 GRIA4P48058 902 aa9.85□□□□□ -0.83
GYPB-210ENST00000508841 HHIPQ96QV1 700 aa9.85□□□□□ -0.83
GYPB-210ENST00000508841 METTL5Q9NRN9 209 aaKnown RBP9.85□□□□□ -0.83
GYPB-210ENST00000508841 SOX13Q9UN79 622 aa9.85□□□□□ -0.83
GYPB-210ENST00000508841 TRIM33Q9UPN9 1127 aa9.85□□□□□ -0.83
GYPB-210ENST00000508841 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 SCAMP3O14828 347 aaKnown RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 AFF1P51825 1210 aaKnown RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 TAF1CQ15572 869 aaPredicted RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 TMEM87AQ8NBN3 555 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 C3orf58Q8NDZ4 430 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 DCAF11Q8TEB1 546 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 CEP44Q9C0F1 390 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 CLEC4MQ9H2X3 399 aaPredicted RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 SRA1Q9HD15 236 aaKnown RBP9.84□□□□□ -0.83
GYPB-210ENST00000508841 USP31Q70CQ4 1352 aa9.84□□□□□ -0.83
GYPB-210ENST00000508841 GRIK5Q16478 980 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 WFDC8Q8IUA0 241 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
GYPB-210ENST00000508841 LACRTQ9GZZ8 138 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 TTF2Q9UNY4 1162 aaKnown RBP9.83□□□□□ -0.84
GYPB-210ENST00000508841 AKAP2Q9Y2D5 859 aa9.83□□□□□ -0.84
GYPB-210ENST00000508841 CTSHP09668 335 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 DGKGP49619 791 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 MAP4K3Q8IVH8 894 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 WNT8BQ93098 351 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 PPME1Q9Y570 386 aa9.82□□□□□ -0.84
GYPB-210ENST00000508841 METTL12A8MUP2 240 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 H3BRJ5 948 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 SPRED3Q2MJR0 410 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 Q8N3U1 123 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 IL22RA1Q8N6P7 574 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 RRAGCQ9HB90 399 aa9.81□□□□□ -0.84
GYPB-210ENST00000508841 SPDYE3A6NKU9 549 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 RLBP1P12271 317 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 TCF3P15923 654 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 ARL4DP49703 201 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 DTWD1Q8N5C7 304 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 PSMG3-AS1Q96PY0 264 aa9.8□□□□□ -0.84
GYPB-210ENST00000508841 NOC4LQ9BVI4 516 aaKnown RBP9.8□□□□□ -0.84
GYPB-210ENST00000508841 SOX17Q9H6I2 414 aaPredicted RBP9.8□□□□□ -0.84
GYPB-210ENST00000508841 PIP4K2BP78356 416 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 PPP2R3AQ06190 1150 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 PCDH1Q08174 1060 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 IKBKEQ14164 716 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 SV2BQ7L1I2 683 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 MKL2Q9ULH7 1088 aa9.79□□□□□ -0.84
GYPB-210ENST00000508841 NID1P14543 1247 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 ZNF76P36508 570 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 RNF34Q969K3 372 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 OSGEPQ9NPF4 335 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
GYPB-210ENST00000508841 B3GALT4O96024 378 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 ESRRAP11474 423 aaPredicted RBP9.77□□□□□ -0.85
GYPB-210ENST00000508841 EPHA1P21709 976 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 BAG6P46379 1132 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 HS2ST1Q7LGA3 356 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 SH2B1Q9NRF2 756 aaPredicted RBP9.77□□□□□ -0.85
GYPB-210ENST00000508841 TMEM39AQ9NV64 488 aa9.77□□□□□ -0.85
GYPB-210ENST00000508841 GPN3Q9UHW5 284 aaPredicted RBP9.77□□□□□ -0.85
GYPB-210ENST00000508841 GNB5O14775 395 aa9.76□□□□□ -0.85
GYPB-210ENST00000508841 PWP1Q13610 501 aa9.76□□□□□ -0.85
GYPB-210ENST00000508841 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
GYPB-210ENST00000508841 SEC31BQ9NQW1 1179 aa9.76□□□□□ -0.85
GYPB-210ENST00000508841 IGSF5Q9NSI5 407 aa9.76□□□□□ -0.85
GYPB-210ENST00000508841 HOXB4P17483 251 aaPredicted RBP9.75□□□□□ -0.85
GYPB-210ENST00000508841 FANCCQ00597 558 aa9.75□□□□□ -0.85
GYPB-210ENST00000508841 CCDC85BQ15834 202 aaPredicted RBP9.75□□□□□ -0.85
GYPB-210ENST00000508841 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
GYPB-210ENST00000508841 NECAB3Q96P71 396 aaPredicted RBP9.75□□□□□ -0.85
GYPB-210ENST00000508841 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
GYPB-210ENST00000508841 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.74□□□□□ -0.85
GYPB-210ENST00000508841 RAC1P63000 192 aa9.74□□□□□ -0.85
GYPB-210ENST00000508841 HNRNPUQ00839 825 aaKnown RBP eCLIP9.74□□□□□ -0.85
GYPB-210ENST00000508841 C19orf57Q0VDD7 668 aa9.74□□□□□ -0.85
GYPB-210ENST00000508841 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
GYPB-210ENST00000508841 ADAMTSL4Q6UY14 1074 aa9.74□□□□□ -0.85
GYPB-210ENST00000508841 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
GYPB-210ENST00000508841 ILDR2Q71H61 639 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms