RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 GGNBP2Q9H3C7 697 aa9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 C19orf57Q0VDD7 668 aa9.41□□□□□ -0.9
TRAPPC13-209ENST00000508304 PIM2Q9P1W9 311 aa9.41□□□□□ -0.9
TRAPPC13-209ENST00000508304 GAS2O43903 313 aaKnown RBP9.4□□□□□ -0.9
TRAPPC13-209ENST00000508304 PDGFAP04085 211 aa9.4□□□□□ -0.9
TRAPPC13-209ENST00000508304 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
TRAPPC13-209ENST00000508304 ARL4DP49703 201 aa9.4□□□□□ -0.9
TRAPPC13-209ENST00000508304 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
TRAPPC13-209ENST00000508304 A6NHS1 94 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 VN1R5Q7Z5H4 357 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 HELQQ8TDG4 1101 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 NXPE3Q969Y0 559 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 TMPRSS13Q9BYE2 586 aa9.39□□□□□ -0.91
TRAPPC13-209ENST00000508304 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 TIAF1O95411 115 aa9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 PCSK2P16519 638 aa9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
TRAPPC13-209ENST00000508304 F13BP05160 661 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 MZF1P28698 734 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 MSMPQ1L6U9 139 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 NUTM2GQ5VZR2 741 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 GIMAP7Q8NHV1 300 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 OSMRQ99650 979 aa9.37□□□□□ -0.91
TRAPPC13-209ENST00000508304 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 IKBKEQ14164 716 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 NOM1Q5C9Z4 860 aaKnown RBP9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 ABI1Q8IZP0 508 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 ZKSCAN3Q9BRR0 538 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 LEMD3Q9Y2U8 911 aa9.36□□□□□ -0.91
TRAPPC13-209ENST00000508304 DLGAP3O95886 979 aa9.35□□□□□ -0.91
TRAPPC13-209ENST00000508304 FOSL1P15407 271 aa9.35□□□□□ -0.91
TRAPPC13-209ENST00000508304 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC13-209ENST00000508304 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC13-209ENST00000508304 CYP4F12Q9HCS2 524 aa9.35□□□□□ -0.91
TRAPPC13-209ENST00000508304 RXRBP28702 533 aa9.34□□□□□ -0.91
TRAPPC13-209ENST00000508304 EIF1AXP47813 144 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-209ENST00000508304 FBXL6Q8N531 539 aa9.34□□□□□ -0.91
TRAPPC13-209ENST00000508304 USP26Q9BXU7 913 aa9.34□□□□□ -0.91
TRAPPC13-209ENST00000508304 EREGO14944 169 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 PRNPP04156 253 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 MPSTP25325 297 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 SHISA5Q8N114 240 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 BHLHE41Q9C0J9 482 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 CCDC39Q9UFE4 941 aa9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
TRAPPC13-209ENST00000508304 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
TRAPPC13-209ENST00000508304 NFXL1Q6ZNB6 911 aa9.32□□□□□ -0.92
TRAPPC13-209ENST00000508304 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 ESRRAP11474 423 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 EDN3P14138 238 aa9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 DRD2P14416 443 aa9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 EXOSC6Q5RKV6 272 aaKnown RBP9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 POLIQ9UNA4 740 aa9.31□□□□□ -0.92
TRAPPC13-209ENST00000508304 PHACTR2O75167 634 aa9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 NFKBIBQ15653 356 aa9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 PAOXQ6QHF9 649 aa9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 CBLL1Q75N03 491 aa9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 FBLIM1Q8WUP2 373 aa9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 METTL22Q9BUU2 404 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC13-209ENST00000508304 PEAR1Q5VY43 1037 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 VSIG10LQ86VR7 867 aa9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 GTF3C2Q8WUA4 911 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 EZH1Q92800 747 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 NRSN2Q9GZP1 204 aa9.29□□□□□ -0.92
TRAPPC13-209ENST00000508304 ADMP35318 185 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 USP11P51784 963 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 FZD5Q13467 585 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 FOXD3Q9UJU5 478 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC13-209ENST00000508304 NPR3P17342 541 aa9.27□□□□□ -0.93
TRAPPC13-209ENST00000508304 SOX4Q06945 474 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC13-209ENST00000508304 ZAR1Q86SH2 424 aa9.27□□□□□ -0.93
TRAPPC13-209ENST00000508304 FBXL18Q96ME1 805 aa9.27□□□□□ -0.93
TRAPPC13-209ENST00000508304 LATS2Q9NRM7 1088 aa9.27□□□□□ -0.93
TRAPPC13-209ENST00000508304 GSTM4Q03013 218 aa9.26□□□□□ -0.93
TRAPPC13-209ENST00000508304 EHHADHQ08426 723 aa9.26□□□□□ -0.93
TRAPPC13-209ENST00000508304 GATA6Q92908 595 aa9.26□□□□□ -0.93
TRAPPC13-209ENST00000508304 TBC1D32Q96NH3 1257 aa9.26□□□□□ -0.93
TRAPPC13-209ENST00000508304 CYP26A1O43174 497 aa9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 MTMR3Q13615 1198 aa9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 COL19A1Q14993 1142 aa9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 YIPF2Q9BWQ6 316 aa9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 BSDC1Q9NW68 430 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC13-209ENST00000508304 ARID1BQ8NFD5 2236 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms