RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
HOXC4-203ENST00000507650 LAMB1P07942 1786 aa20.3■□□□□ 0.84
HOXC4-203ENST00000507650 OTOFQ9HC10 1997 aa20.29■□□□□ 0.84
HOXC4-203ENST00000507650 RGMBQ6NW40 437 aa20.29■□□□□ 0.84
HOXC4-203ENST00000507650 FAM84BQ96KN1 310 aaPredicted RBP20.29■□□□□ 0.84
HOXC4-203ENST00000507650 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
HOXC4-203ENST00000507650 SSC5DA1L4H1 1573 aa20.29■□□□□ 0.84
HOXC4-203ENST00000507650 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
HOXC4-203ENST00000507650 BRPF1P55201 1214 aaPredicted RBP20.28■□□□□ 0.84
HOXC4-203ENST00000507650 UBE4AQ14139 1066 aa20.28■□□□□ 0.84
HOXC4-203ENST00000507650 ZNF804AQ7Z570 1209 aa20.28■□□□□ 0.84
HOXC4-203ENST00000507650 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
HOXC4-203ENST00000507650 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
HOXC4-203ENST00000507650 MIER1Q8N108 512 aa20.27■□□□□ 0.84
HOXC4-203ENST00000507650 OGFOD1Q8N543 542 aa20.27■□□□□ 0.84
HOXC4-203ENST00000507650 FAM205AQ6ZU69 1335 aa20.27■□□□□ 0.83
HOXC4-203ENST00000507650 F8W031 263 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-203ENST00000507650 CAPN15O75808 1086 aa20.26■□□□□ 0.83
HOXC4-203ENST00000507650 SLC10A3P09131 477 aa20.26■□□□□ 0.83
HOXC4-203ENST00000507650 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-203ENST00000507650 GRIK5Q16478 980 aa20.26■□□□□ 0.83
HOXC4-203ENST00000507650 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
HOXC4-203ENST00000507650 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
HOXC4-203ENST00000507650 FKBP1AP62942 108 aaKnown RBP20.25■□□□□ 0.83
HOXC4-203ENST00000507650 NOGQ13253 232 aa20.25■□□□□ 0.83
HOXC4-203ENST00000507650 RASAL3Q86YV0 1011 aa20.25■□□□□ 0.83
HOXC4-203ENST00000507650 MTMR14Q8NCE2 650 aa20.25■□□□□ 0.83
HOXC4-203ENST00000507650 ZNF157P51786 506 aaPredicted RBP20.24■□□□□ 0.83
HOXC4-203ENST00000507650 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
HOXC4-203ENST00000507650 FBXO33Q7Z6M2 555 aa20.24■□□□□ 0.83
HOXC4-203ENST00000507650 COL1A1P02452 1464 aaPredicted RBP20.24■□□□□ 0.83
HOXC4-203ENST00000507650 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 FGFR2P21802 821 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 HIBADHP31937 336 aaKnown RBP20.23■□□□□ 0.83
HOXC4-203ENST00000507650 MMP14P50281 582 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 KIF23Q02241 960 aaPredicted RBP20.23■□□□□ 0.83
HOXC4-203ENST00000507650 CFAP100Q494V2 611 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
HOXC4-203ENST00000507650 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 FZD1Q9UP38 647 aa20.23■□□□□ 0.83
HOXC4-203ENST00000507650 SPDYE2BA6NHP3 402 aa20.22■□□□□ 0.83
HOXC4-203ENST00000507650 PDE8BO95263 885 aa20.22■□□□□ 0.83
HOXC4-203ENST00000507650 SPDYE6P0CI01 402 aa20.22■□□□□ 0.83
HOXC4-203ENST00000507650 METTL24Q5JXM2 366 aa20.22■□□□□ 0.83
HOXC4-203ENST00000507650 MEIS3Q99687 375 aa20.22■□□□□ 0.83
HOXC4-203ENST00000507650 IQSEC3Q9UPP2 1182 aaPredicted RBP20.22■□□□□ 0.83
HOXC4-203ENST00000507650 FKBP1BP68106 108 aa20.21■□□□□ 0.83
HOXC4-203ENST00000507650 DLGAP5Q15398 846 aa20.21■□□□□ 0.83
HOXC4-203ENST00000507650 MFSD14BQ5SR56 506 aa20.21■□□□□ 0.83
HOXC4-203ENST00000507650 CCDC102AQ96A19 550 aa20.21■□□□□ 0.83
HOXC4-203ENST00000507650 CLRN2A0PK11 232 aa20.2■□□□□ 0.82
HOXC4-203ENST00000507650 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
HOXC4-203ENST00000507650 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
HOXC4-203ENST00000507650 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
HOXC4-203ENST00000507650 EYA2O00167 538 aa20.19■□□□□ 0.82
HOXC4-203ENST00000507650 BCAR3O75815 825 aa20.19■□□□□ 0.82
HOXC4-203ENST00000507650 BCAMP50895 628 aa20.19■□□□□ 0.82
HOXC4-203ENST00000507650 BEGAINQ9BUH8 593 aa20.19■□□□□ 0.82
HOXC4-203ENST00000507650 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
HOXC4-203ENST00000507650 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
HOXC4-203ENST00000507650 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
HOXC4-203ENST00000507650 CDAN1Q8IWY9 1227 aa20.18■□□□□ 0.82
HOXC4-203ENST00000507650 DEFB129Q9H1M3 183 aa20.18■□□□□ 0.82
HOXC4-203ENST00000507650 PRKG1Q13976 671 aa20.17■□□□□ 0.82
HOXC4-203ENST00000507650 DIEXFQ68CQ4 756 aaKnown RBP20.17■□□□□ 0.82
HOXC4-203ENST00000507650 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
HOXC4-203ENST00000507650 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
HOXC4-203ENST00000507650 PA2G4Q9UQ80 394 aaKnown RBP20.17■□□□□ 0.82
HOXC4-203ENST00000507650 CA12O43570 354 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 TRIM27P14373 513 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 PUM3Q15397 648 aaKnown RBP20.16■□□□□ 0.82
HOXC4-203ENST00000507650 LDLRAD1Q5T700 205 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 SIL1Q9H173 461 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 RNF186Q9NXI6 227 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
HOXC4-203ENST00000507650 CHAF1AQ13111 956 aaPredicted RBP20.15■□□□□ 0.82
HOXC4-203ENST00000507650 SPDYE2Q495Y8 402 aa20.15■□□□□ 0.82
HOXC4-203ENST00000507650 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
HOXC4-203ENST00000507650 NBPF12Q5TAG4 269 aaPredicted RBP20.14■□□□□ 0.81
HOXC4-203ENST00000507650 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
HOXC4-203ENST00000507650 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
HOXC4-203ENST00000507650 SERPINA10Q9UK55 444 aa20.14■□□□□ 0.81
HOXC4-203ENST00000507650 TRPA1O75762 1119 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 CIAO1O76071 339 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 CRKP46108 304 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
HOXC4-203ENST00000507650 TTLL12Q14166 644 aaPredicted RBP20.13■□□□□ 0.81
HOXC4-203ENST00000507650 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
HOXC4-203ENST00000507650 ABHD8Q96I13 439 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 CLMNQ96JQ2 1002 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 TEPSINQ96N21 525 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 SAGE1Q9NXZ1 904 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 ANGEL1Q9UNK9 670 aaKnown RBP20.13■□□□□ 0.81
HOXC4-203ENST00000507650 MYH2Q9UKX2 1941 aa20.13■□□□□ 0.81
HOXC4-203ENST00000507650 RBM5P52756 815 aaKnown RBP eCLIP20.12■□□□□ 0.81
HOXC4-203ENST00000507650 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
HOXC4-203ENST00000507650 RASA3Q14644 834 aa20.12■□□□□ 0.81
HOXC4-203ENST00000507650 MAP3K11Q16584 847 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms