RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 TBC1D10BQ4KMP7 808 aaPredicted RBP24.56■■□□□ 1.52
DDR1-259ENST00000507046 HDAC9Q9UKV0 1011 aa24.56■■□□□ 1.52
DDR1-259ENST00000507046 FAM205AQ6ZU69 1335 aa24.56■■□□□ 1.52
DDR1-259ENST00000507046 RBM26Q5T8P6 1007 aaKnown RBP24.55■■□□□ 1.52
DDR1-259ENST00000507046 ZC3H15Q8WU90 426 aaKnown RBP24.55■■□□□ 1.52
DDR1-259ENST00000507046 JAG2Q9Y219 1238 aa24.55■■□□□ 1.52
DDR1-259ENST00000507046 NOP58Q9Y2X3 529 aaKnown RBP24.55■■□□□ 1.52
DDR1-259ENST00000507046 A0A1B0GUL7 405 aa24.54■■□□□ 1.52
DDR1-259ENST00000507046 MAP1SQ66K74 1059 aaPredicted RBP24.54■■□□□ 1.52
DDR1-259ENST00000507046 KIAA0825Q8IV33 1275 aa24.54■■□□□ 1.52
DDR1-259ENST00000507046 MYOZ2Q9NPC6 264 aa24.54■■□□□ 1.52
DDR1-259ENST00000507046 GNL3LQ9NVN8 582 aaKnown RBP24.54■■□□□ 1.52
DDR1-259ENST00000507046 IQSEC3Q9UPP2 1182 aaPredicted RBP24.54■■□□□ 1.52
DDR1-259ENST00000507046 HIRAP54198 1017 aaPredicted RBP24.53■■□□□ 1.52
DDR1-259ENST00000507046 CNTROBQ8N137 903 aa24.53■■□□□ 1.52
DDR1-259ENST00000507046 CHAF1AQ13111 956 aaPredicted RBP24.52■■□□□ 1.52
DDR1-259ENST00000507046 HSP90AB4PQ58FF6 505 aa24.52■■□□□ 1.52
DDR1-259ENST00000507046 MFSD14BQ5SR56 506 aa24.52■■□□□ 1.52
DDR1-259ENST00000507046 CERS5Q8N5B7 392 aa24.52■■□□□ 1.52
DDR1-259ENST00000507046 TBC1D22AQ8WUA7 517 aa24.52■■□□□ 1.52
DDR1-259ENST00000507046 MYH13Q9UKX3 1938 aa24.51■■□□□ 1.51
DDR1-259ENST00000507046 EGFRP00533 1210 aa24.51■■□□□ 1.51
DDR1-259ENST00000507046 ERC1Q8IUD2 1116 aa24.51■■□□□ 1.51
DDR1-259ENST00000507046 NEUROD6Q96NK8 337 aa24.51■■□□□ 1.51
DDR1-259ENST00000507046 ADORA1P30542 326 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 APLP1P51693 650 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 TIMM10P62072 90 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 XAGE2Q96GT9 111 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 GPR108Q9NPR9 543 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 PGAP2Q9UHJ9 254 aa24.5■■□□□ 1.51
DDR1-259ENST00000507046 F8W031 263 aaPredicted RBP24.49■■□□□ 1.51
DDR1-259ENST00000507046 PHKA1P46020 1223 aa24.49■■□□□ 1.51
DDR1-259ENST00000507046 CCDC102BQ68D86 513 aa24.49■■□□□ 1.51
DDR1-259ENST00000507046 EXOC6BQ9Y2D4 811 aa24.49■■□□□ 1.51
DDR1-259ENST00000507046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.49■■□□□ 1.51
DDR1-259ENST00000507046 SEMA3EO15041 775 aa24.48■■□□□ 1.51
DDR1-259ENST00000507046 ITGBL1O95965 494 aaPredicted RBP24.48■■□□□ 1.51
DDR1-259ENST00000507046 TNNI3KQ59H18 835 aa24.48■■□□□ 1.51
DDR1-259ENST00000507046 GORABQ5T7V8 394 aa24.48■■□□□ 1.51
DDR1-259ENST00000507046 DCPSQ96C86 337 aaKnown RBP24.48■■□□□ 1.51
DDR1-259ENST00000507046 PASKQ96RG2 1323 aa24.48■■□□□ 1.51
DDR1-259ENST00000507046 FPGT-TNNI3KV9GXZ4 949 aa24.48■■□□□ 1.51
DDR1-259ENST00000507046 SCARF1Q14162 830 aa24.47■■□□□ 1.51
DDR1-259ENST00000507046 SIRT2Q8IXJ6 389 aa24.47■■□□□ 1.51
DDR1-259ENST00000507046 WDR66Q8TBY9 1149 aa24.47■■□□□ 1.51
DDR1-259ENST00000507046 GGA3Q9NZ52 723 aa24.47■■□□□ 1.51
DDR1-259ENST00000507046 DENND2AQ9ULE3 1009 aa24.47■■□□□ 1.51
DDR1-259ENST00000507046 COL1A1P02452 1464 aaPredicted RBP24.46■■□□□ 1.51
DDR1-259ENST00000507046 CDC37L1Q7L3B6 337 aa24.46■■□□□ 1.51
DDR1-259ENST00000507046 ZBTB22O15209 634 aa24.45■■□□□ 1.5
DDR1-259ENST00000507046 CRBNQ96SW2 442 aa24.45■■□□□ 1.5
DDR1-259ENST00000507046 GLIS2Q9BZE0 524 aaPredicted RBP24.45■■□□□ 1.5
DDR1-259ENST00000507046 TTF2Q9UNY4 1162 aaKnown RBP24.45■■□□□ 1.5
DDR1-259ENST00000507046 WNT10BO00744 389 aa24.44■■□□□ 1.5
DDR1-259ENST00000507046 DLGAP5Q15398 846 aa24.44■■□□□ 1.5
DDR1-259ENST00000507046 KRT26Q7Z3Y9 468 aa24.44■■□□□ 1.5
DDR1-259ENST00000507046 SUGT1Q9Y2Z0 365 aa24.44■■□□□ 1.5
DDR1-259ENST00000507046 MAST3O60307 1309 aa24.43■■□□□ 1.5
DDR1-259ENST00000507046 PITPNM2Q9BZ72 1349 aa24.43■■□□□ 1.5
DDR1-259ENST00000507046 NBPF9Q3BBW0 867 aa24.43■■□□□ 1.5
DDR1-259ENST00000507046 ANGEL2Q5VTE6 544 aaKnown RBP24.43■■□□□ 1.5
DDR1-259ENST00000507046 SULF1Q8IWU6 871 aa24.43■■□□□ 1.5
DDR1-259ENST00000507046 KIF1BPQ96EK5 621 aa24.43■■□□□ 1.5
DDR1-259ENST00000507046 ASTN2O75129 1339 aaPredicted RBP24.42■■□□□ 1.5
DDR1-259ENST00000507046 PDS5AQ29RF7 1337 aaKnown RBP24.42■■□□□ 1.5
DDR1-259ENST00000507046 RAB11FIP3O75154 756 aa24.42■■□□□ 1.5
DDR1-259ENST00000507046 RBM5P52756 815 aaKnown RBP eCLIP24.42■■□□□ 1.5
DDR1-259ENST00000507046 RASGRF1Q13972 1273 aa24.42■■□□□ 1.5
DDR1-259ENST00000507046 CFAP100Q494V2 611 aa24.42■■□□□ 1.5
DDR1-259ENST00000507046 MTMR14Q8NCE2 650 aa24.42■■□□□ 1.5
DDR1-259ENST00000507046 SERPINA10Q9UK55 444 aa24.42■■□□□ 1.5
DDR1-259ENST00000507046 TRAF5O00463 557 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 UQCRFS1P1P0C7P4 283 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 CCDC158Q5M9N0 1113 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 ZGPATQ8N5A5 531 aaKnown RBP24.41■■□□□ 1.5
DDR1-259ENST00000507046 RHPN1Q8TCX5 695 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 DBNDD2Q9BQY9 259 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 CREBZFQ9NS37 354 aa24.41■■□□□ 1.5
DDR1-259ENST00000507046 SALL1Q9NSC2 1324 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 TMEM88BA6NKF7 163 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 APBB1O00213 710 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 MYO1BO43795 1136 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 ARID4AP29374 1257 aaPredicted RBP24.4■■□□□ 1.5
DDR1-259ENST00000507046 TTC39AQ5SRH9 613 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 USP48Q86UV5 1035 aa24.4■■□□□ 1.5
DDR1-259ENST00000507046 ZBED3Q96IU2 234 aaPredicted RBP24.4■■□□□ 1.5
DDR1-259ENST00000507046 SUPT16HQ9Y5B9 1047 aaKnown RBP24.4■■□□□ 1.5
DDR1-259ENST00000507046 SPDYE2BA6NHP3 402 aa24.39■■□□□ 1.49
DDR1-259ENST00000507046 SPDYE6P0CI01 402 aa24.39■■□□□ 1.49
DDR1-259ENST00000507046 HDLBPQ00341 1268 aaKnown RBP24.39■■□□□ 1.49
DDR1-259ENST00000507046 AACSQ86V21 672 aa24.39■■□□□ 1.49
DDR1-259ENST00000507046 TRPM7Q96QT4 1865 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 ECM29Q5VYK3 1845 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 ADM5C9JUS6 153 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 CRKP46108 304 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 AAMPQ13685 434 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 GRIK5Q16478 980 aa24.38■■□□□ 1.49
DDR1-259ENST00000507046 APOBEC3FQ8IUX4 373 aaKnown RBP24.38■■□□□ 1.49
DDR1-259ENST00000507046 CLASRPQ8N2M8 674 aaKnown RBP24.38■■□□□ 1.49
DDR1-259ENST00000507046 TEKT1Q969V4 418 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms