RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 GMPSP49915 693 aaPredicted RBP11.96□□□□□ -0.49
SFXN1-205ENST00000506963 GTF2IP78347 998 aa11.96□□□□□ -0.49
SFXN1-205ENST00000506963 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
SFXN1-205ENST00000506963 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.49
SFXN1-205ENST00000506963 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
SFXN1-205ENST00000506963 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
SFXN1-205ENST00000506963 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
SFXN1-205ENST00000506963 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
SFXN1-205ENST00000506963 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
SFXN1-205ENST00000506963 COL1A1P02452 1464 aaPredicted RBP11.95□□□□□ -0.5
SFXN1-205ENST00000506963 KIF3CO14782 793 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 ZNF280AP59817 542 aaPredicted RBP11.95□□□□□ -0.5
SFXN1-205ENST00000506963 AACSQ86V21 672 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 SUGT1Q9Y2Z0 365 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
SFXN1-205ENST00000506963 IGSF3O75054 1194 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 RASGRF1Q13972 1273 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 RRAGCQ9HB90 399 aa11.94□□□□□ -0.5
SFXN1-205ENST00000506963 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
SFXN1-205ENST00000506963 IGHDP01880 384 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 EPHX2P34913 555 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 EPS15P42566 896 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 ERICH6BQ5W0A0 696 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
SFXN1-205ENST00000506963 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
SFXN1-205ENST00000506963 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
SFXN1-205ENST00000506963 CCDC8Q9H0W5 538 aaPredicted RBP11.93□□□□□ -0.5
SFXN1-205ENST00000506963 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
SFXN1-205ENST00000506963 IQSEC3Q9UPP2 1182 aaPredicted RBP11.93□□□□□ -0.5
SFXN1-205ENST00000506963 H7C1D1 291 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 APBB1O00213 710 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
SFXN1-205ENST00000506963 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
SFXN1-205ENST00000506963 MCAMP43121 646 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 HDLBPQ00341 1268 aaKnown RBP11.92□□□□□ -0.5
SFXN1-205ENST00000506963 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
SFXN1-205ENST00000506963 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 ZGPATQ8N5A5 531 aaKnown RBP11.92□□□□□ -0.5
SFXN1-205ENST00000506963 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 HMG20BQ9P0W2 317 aa11.92□□□□□ -0.5
SFXN1-205ENST00000506963 NEFLP07196 543 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 SCARF1Q14162 830 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 MTMR14Q8NCE2 650 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 ZC3H15Q8WU90 426 aaKnown RBP11.91□□□□□ -0.5
SFXN1-205ENST00000506963 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
SFXN1-205ENST00000506963 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
SFXN1-205ENST00000506963 MAST3O60307 1309 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 SHTN1A0MZ66 631 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
SFXN1-205ENST00000506963 ATP5JP18859 108 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.5
SFXN1-205ENST00000506963 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
SFXN1-205ENST00000506963 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 HDAC9Q9UKV0 1011 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
SFXN1-205ENST00000506963 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 TOMM70O94826 608 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 HIRAP54198 1017 aaPredicted RBP11.89□□□□□ -0.51
SFXN1-205ENST00000506963 NUCB1Q02818 461 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 GRIK5Q16478 980 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 SPTY2D1Q68D10 685 aaPredicted RBP11.89□□□□□ -0.51
SFXN1-205ENST00000506963 TMED8Q6PL24 325 aaPredicted RBP11.89□□□□□ -0.51
SFXN1-205ENST00000506963 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 MYOZ2Q9NPC6 264 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
SFXN1-205ENST00000506963 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 EGFRP00533 1210 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 PRDX5P30044 214 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
SFXN1-205ENST00000506963 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
SFXN1-205ENST00000506963 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
SFXN1-205ENST00000506963 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms