RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 COA1Q9GZY4 146 aa17.02■□□□□ 0.32
SERF1B-204ENST00000506542 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.31
SERF1B-204ENST00000506542 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 PDE8BO95263 885 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 HSPA6P17066 643 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SERF1B-204ENST00000506542 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 PODNQ7Z5L7 613 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
SERF1B-204ENST00000506542 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
SERF1B-204ENST00000506542 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
SERF1B-204ENST00000506542 FSTL1Q12841 308 aa17■□□□□ 0.31
SERF1B-204ENST00000506542 BMP2KLQ5H9B9 411 aa17■□□□□ 0.31
SERF1B-204ENST00000506542 GMLQ99445 158 aa17■□□□□ 0.31
SERF1B-204ENST00000506542 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
SERF1B-204ENST00000506542 SCAF8Q9UPN6 1271 aaKnown RBP17■□□□□ 0.31
SERF1B-204ENST00000506542 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 BCAMP50895 628 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
SERF1B-204ENST00000506542 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 CERS5Q8N5B7 392 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
SERF1B-204ENST00000506542 TRAF5O00463 557 aa16.98■□□□□ 0.31
SERF1B-204ENST00000506542 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
SERF1B-204ENST00000506542 ZNF804AQ7Z570 1209 aa16.98■□□□□ 0.31
SERF1B-204ENST00000506542 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
SERF1B-204ENST00000506542 ITGBL1O95965 494 aaPredicted RBP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 IL1R1P14778 569 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 FGFR2P21802 821 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 KIAA0825Q8IV33 1275 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 DPF2Q92785 391 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 OSBPL3Q9H4L5 887 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 PCDHAC2Q9Y5I4 1007 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 F8W031 263 aaPredicted RBP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 H7C1D1 291 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 ADORA1P30542 326 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 HIBADHP31937 336 aaKnown RBP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 TFCP2Q12800 502 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 PUM3Q15397 648 aaKnown RBP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 USP50Q70EL3 339 aaPredicted RBP16.97■□□□□ 0.31
SERF1B-204ENST00000506542 IL1RAPL2Q9NP60 686 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 AK9Q5TCS8 1911 aa16.97■□□□□ 0.31
SERF1B-204ENST00000506542 CIAO1O76071 339 aa16.96■□□□□ 0.31
SERF1B-204ENST00000506542 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.31
SERF1B-204ENST00000506542 PDE1AP54750 535 aa16.96■□□□□ 0.31
SERF1B-204ENST00000506542 GRIK5Q16478 980 aa16.96■□□□□ 0.31
SERF1B-204ENST00000506542 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
SERF1B-204ENST00000506542 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
SERF1B-204ENST00000506542 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
SERF1B-204ENST00000506542 ATP2B3Q16720 1220 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 KIF4BQ2VIQ3 1234 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 PASKQ96RG2 1323 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 ARAP2Q8WZ64 1704 aa16.95■□□□□ 0.3
SERF1B-204ENST00000506542 SASH1O94885 1247 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 GSPT1P15170 499 aaKnown RBP16.94■□□□□ 0.3
SERF1B-204ENST00000506542 MX1P20591 662 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
SERF1B-204ENST00000506542 TIMM10P62072 90 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 TDRD7Q8NHU6 1098 aaKnown RBP16.94■□□□□ 0.3
SERF1B-204ENST00000506542 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
SERF1B-204ENST00000506542 ZNF280AP59817 542 aaPredicted RBP16.94■□□□□ 0.3
SERF1B-204ENST00000506542 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
SERF1B-204ENST00000506542 AOX1Q06278 1338 aa16.93■□□□□ 0.3
SERF1B-204ENST00000506542 APLP1P51693 650 aa16.93■□□□□ 0.3
SERF1B-204ENST00000506542 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
SERF1B-204ENST00000506542 ZNF609O15014 1411 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
SERF1B-204ENST00000506542 SLC5A1P13866 664 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 PHKA1P46020 1223 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 LPIN2Q92539 896 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 TRPM7Q96QT4 1865 aa16.92■□□□□ 0.3
SERF1B-204ENST00000506542 SCARF1Q14162 830 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
SERF1B-204ENST00000506542 MFSD14BQ5SR56 506 aa16.91■□□□□ 0.3
SERF1B-204ENST00000506542 ANGEL2Q5VTE6 544 aaKnown RBP16.91■□□□□ 0.3
SERF1B-204ENST00000506542 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
SERF1B-204ENST00000506542 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms