RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
TRIM6-208ENST00000506134 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
TRIM6-208ENST00000506134 SCARF1Q14162 830 aa12.05□□□□□ -0.48
TRIM6-208ENST00000506134 TTC39AQ5SRH9 613 aa12.05□□□□□ -0.48
TRIM6-208ENST00000506134 TTLL5Q6EMB2 1281 aa12.05□□□□□ -0.48
TRIM6-208ENST00000506134 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
TRIM6-208ENST00000506134 ZNF541Q9H0D2 1346 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 PSMD14O00487 310 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 PDE4AP27815 886 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
TRIM6-208ENST00000506134 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
TRIM6-208ENST00000506134 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
TRIM6-208ENST00000506134 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
TRIM6-208ENST00000506134 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 SALL3Q9BXA9 1300 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
TRIM6-208ENST00000506134 VIL1P09327 827 aaKnown RBP12.03□□□□□ -0.48
TRIM6-208ENST00000506134 MCAMP43121 646 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 STRIP1Q5VSL9 837 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 ZNF512BQ96KM6 892 aaPredicted RBP12.03□□□□□ -0.48
TRIM6-208ENST00000506134 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
TRIM6-208ENST00000506134 FAM205AQ6ZU69 1335 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 SEMA3EO15041 775 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 ATP5JP18859 108 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 MX1P20591 662 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 TNIP1Q15025 636 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 DACT2Q5SW24 774 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 PLEKHM2Q8IWE5 1019 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 SPATA5Q8NB90 893 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 BOLA2Q9H3K6 86 aa12.02□□□□□ -0.49
TRIM6-208ENST00000506134 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
TRIM6-208ENST00000506134 ZAP70P43403 619 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 PDE1AP54750 535 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 GRIK5Q16478 980 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
TRIM6-208ENST00000506134 COL1A1P02452 1464 aaPredicted RBP12.01□□□□□ -0.49
TRIM6-208ENST00000506134 TTC41PQ6P2S7 1318 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 GLTPD2A6NH11 291 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
TRIM6-208ENST00000506134 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
TRIM6-208ENST00000506134 GPC2Q8N158 579 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 PI4K2BQ8TCG2 481 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12□□□□□ -0.49
TRIM6-208ENST00000506134 GPATCH3Q96I76 525 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 ANTXR1Q9H6X2 564 aa12□□□□□ -0.49
TRIM6-208ENST00000506134 AKAP11Q9UKA4 1901 aa11.99□□□□□ -0.49
TRIM6-208ENST00000506134 TIAM2Q8IVF5 1701 aa11.99□□□□□ -0.49
TRIM6-208ENST00000506134 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
TRIM6-208ENST00000506134 CYP2E1P05181 493 aaPredicted RBP11.99□□□□□ -0.49
TRIM6-208ENST00000506134 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
TRIM6-208ENST00000506134 EDC3Q96F86 508 aaKnown RBP11.99□□□□□ -0.49
TRIM6-208ENST00000506134 GMLQ99445 158 aa11.99□□□□□ -0.49
TRIM6-208ENST00000506134 DNAJC2Q99543 621 aaKnown RBP11.99□□□□□ -0.49
TRIM6-208ENST00000506134 HAUS7Q99871 368 aa11.99□□□□□ -0.49
TRIM6-208ENST00000506134 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
TRIM6-208ENST00000506134 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
TRIM6-208ENST00000506134 ERC2O15083 957 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
TRIM6-208ENST00000506134 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
TRIM6-208ENST00000506134 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
TRIM6-208ENST00000506134 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
TRIM6-208ENST00000506134 PDS5AQ29RF7 1337 aaKnown RBP11.97□□□□□ -0.49
TRIM6-208ENST00000506134 SALL1Q9NSC2 1324 aa11.97□□□□□ -0.49
TRIM6-208ENST00000506134 PSME4Q14997 1843 aa11.97□□□□□ -0.49
TRIM6-208ENST00000506134 GOLIM4O00461 696 aa11.97□□□□□ -0.49
TRIM6-208ENST00000506134 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
TRIM6-208ENST00000506134 PRDX5P30044 214 aa11.97□□□□□ -0.49
TRIM6-208ENST00000506134 CNOT7Q9UIV1 285 aaKnown RBP11.97□□□□□ -0.49
TRIM6-208ENST00000506134 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
TRIM6-208ENST00000506134 ZNF646O15015 1829 aaPredicted RBP11.97□□□□□ -0.49
TRIM6-208ENST00000506134 POTECB2RU33 542 aa11.96□□□□□ -0.49
TRIM6-208ENST00000506134 LDHBP07195 334 aaKnown RBP11.96□□□□□ -0.49
TRIM6-208ENST00000506134 USP17L8P0C7I0 530 aa11.96□□□□□ -0.49
TRIM6-208ENST00000506134 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
TRIM6-208ENST00000506134 EPS15P42566 896 aa11.96□□□□□ -0.49
TRIM6-208ENST00000506134 RGS3P49796 1198 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms