RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 KIF2CQ99661 725 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 PIH1D3Q9NQM4 214 aaKnown RBP14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 RBM8AQ9Y5S9 174 aaKnown RBP14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 LRRC37AA6NMS7 1700 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 PDE6AP16499 860 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 POLD1P28340 1107 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 PTH1RQ03431 593 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 GRIPAP1Q4V328 841 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 WDR66Q8TBY9 1149 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 IL25Q9H293 177 aa14.39□□□□□ -0.11
POLR2J3-211ENST00000506060 DOCK2Q92608 1830 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 C6orf229H3BNL8 230 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 NECTIN1Q15223 517 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 MPNDQ8N594 471 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 KCNB2Q92953 911 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 EYA3Q99504 573 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 TBC1D2Q9BYX2 928 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 TM6SF1Q9BZW5 370 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 MAST3O60307 1309 aa14.38□□□□□ -0.11
POLR2J3-211ENST00000506060 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 GNAT2P19087 354 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 NEK4P51957 841 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 CREB3L3Q68CJ9 461 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 DPP8Q6V1X1 898 aaPredicted RBP14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 AIDAQ96BJ3 306 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 RAI14Q9P0K7 980 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 ABCF2Q9UG63 623 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 DUOX1Q9NRD9 1551 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 ZNF532Q9HCE3 1301 aa14.37□□□□□ -0.11
POLR2J3-211ENST00000506060 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 SLC27A2O14975 620 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 GPAA1O43292 621 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 TSGA10IPQ3SY00 556 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 CCDC129Q6ZRS4 1044 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 MAGEB6Q8N7X4 407 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 TDRD7Q8NHU6 1098 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 TBC1D16Q8TBP0 767 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 ZC3H12CQ9C0D7 883 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 IQSEC3Q9UPP2 1182 aaPredicted RBP14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 SALL1Q9NSC2 1324 aa14.36□□□□□ -0.11
POLR2J3-211ENST00000506060 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 G3V3G9 751 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 M0R2C6 588 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 GSTO1P78417 241 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 SUPT20HQ8NEM7 779 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 MTFR1LQ9H019 292 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 IRS2Q9Y4H2 1338 aa14.35□□□□□ -0.11
POLR2J3-211ENST00000506060 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 CYP7A1P22680 504 aa14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 COA1Q9GZY4 146 aa14.34□□□□□ -0.11
POLR2J3-211ENST00000506060 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.11
POLR2J3-211ENST00000506060 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.11
POLR2J3-211ENST00000506060 LDHCP07864 332 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 IL1R1P14778 569 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 KLRK1P26718 216 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 BLOC1S2Q6QNY1 142 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 CERS3Q8IU89 383 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 CD209Q9NNX6 404 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 POLLQ9UGP5 575 aa14.33□□□□□ -0.12
POLR2J3-211ENST00000506060 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 APPP05067 770 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 LDHBP07195 334 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 SLC4A3P48751 1232 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 TXNRD3Q86VQ6 643 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 DZIP1Q86YF9 867 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 NOL10Q9BSC4 688 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 ZMYM6O95789 1325 aa14.32□□□□□ -0.12
POLR2J3-211ENST00000506060 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
POLR2J3-211ENST00000506060 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
POLR2J3-211ENST00000506060 MBD4O95243 580 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms