RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 AKAP11Q9UKA4 1901 aa13.86□□□□□ -0.19
SGCA-205ENST00000505964 CELF2O95319 508 aaKnown RBP13.86□□□□□ -0.19
SGCA-205ENST00000505964 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
SGCA-205ENST00000505964 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
SGCA-205ENST00000505964 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
SGCA-205ENST00000505964 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
SGCA-205ENST00000505964 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
SGCA-205ENST00000505964 ERC2O15083 957 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 PPIP5K2O43314 1243 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 BBOX1O75936 387 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 AOC3Q16853 763 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
SGCA-205ENST00000505964 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
SGCA-205ENST00000505964 CCDC8Q9H0W5 538 aaPredicted RBP13.85□□□□□ -0.19
SGCA-205ENST00000505964 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
SGCA-205ENST00000505964 GLRX3O76003 335 aaKnown RBP13.84□□□□□ -0.19
SGCA-205ENST00000505964 FGFR2P21802 821 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 MAP2K2P36507 400 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 CHRNDQ07001 517 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 DGKZQ13574 1117 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 PUM3Q15397 648 aaKnown RBP13.84□□□□□ -0.19
SGCA-205ENST00000505964 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 CC2D2BQ6DHV5 1058 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 DBNLQ9UJU6 430 aaKnown RBP13.84□□□□□ -0.19
SGCA-205ENST00000505964 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
SGCA-205ENST00000505964 TIMM10P62072 90 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 CIAPIN1Q6FI81 312 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 LPIN2Q92539 896 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 DBNDD2Q9BQY9 259 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 ADARB2Q9NS39 739 aaKnown RBP13.83□□□□□ -0.2
SGCA-205ENST00000505964 MYH13Q9UKX3 1938 aa13.83□□□□□ -0.2
SGCA-205ENST00000505964 GSPT1P15170 499 aaKnown RBP13.82□□□□□ -0.2
SGCA-205ENST00000505964 ATP5JP18859 108 aa13.82□□□□□ -0.2
SGCA-205ENST00000505964 GMPSP49915 693 aaPredicted RBP13.82□□□□□ -0.2
SGCA-205ENST00000505964 UBE4AQ14139 1066 aa13.82□□□□□ -0.2
SGCA-205ENST00000505964 XAGE2Q96GT9 111 aa13.82□□□□□ -0.2
SGCA-205ENST00000505964 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
SGCA-205ENST00000505964 TLR7Q9NYK1 1049 aaKnown RBP13.82□□□□□ -0.2
SGCA-205ENST00000505964 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
SGCA-205ENST00000505964 SLC5A1P13866 664 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 CXCL9Q07325 125 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 DLK2Q6UY11 383 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
SGCA-205ENST00000505964 ZNF512BQ96KM6 892 aaPredicted RBP13.81□□□□□ -0.2
SGCA-205ENST00000505964 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 MYH7P12883 1935 aa13.81□□□□□ -0.2
SGCA-205ENST00000505964 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
SGCA-205ENST00000505964 CA12O43570 354 aa13.8□□□□□ -0.2
SGCA-205ENST00000505964 CCDC158Q5M9N0 1113 aa13.8□□□□□ -0.2
SGCA-205ENST00000505964 HELBQ8NG08 1087 aaPredicted RBP13.8□□□□□ -0.2
SGCA-205ENST00000505964 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
SGCA-205ENST00000505964 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
SGCA-205ENST00000505964 ZBTB22O15209 634 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 TAF5LO75529 589 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 RAD17O75943 681 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 SDSP20132 328 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
SGCA-205ENST00000505964 GORABQ5T7V8 394 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 XDHP47989 1333 aa13.79□□□□□ -0.2
SGCA-205ENST00000505964 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 ADORA1P30542 326 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 SOX10P56693 466 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 GRIPAP1Q4V328 841 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
SGCA-205ENST00000505964 MKI67P46013 3256 aaKnown RBP13.77□□□□□ -0.2
SGCA-205ENST00000505964 EIF5BO60841 1220 aaKnown RBP13.77□□□□□ -0.21
SGCA-205ENST00000505964 CDC45O75419 566 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
SGCA-205ENST00000505964 KCNJ4P48050 445 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 HUNKP57058 714 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
SGCA-205ENST00000505964 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 HAUS7Q99871 368 aa13.77□□□□□ -0.21
SGCA-205ENST00000505964 TMX4Q9H1E5 349 aaPredicted RBP13.77□□□□□ -0.21
SGCA-205ENST00000505964 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
SGCA-205ENST00000505964 GPSM2P81274 684 aa13.76□□□□□ -0.21
SGCA-205ENST00000505964 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
SGCA-205ENST00000505964 BOLA2Q9H3K6 86 aa13.76□□□□□ -0.21
SGCA-205ENST00000505964 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
SGCA-205ENST00000505964 CENPFP49454 3210 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms