RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 GREM2Q9H772 168 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 INHBEP58166 350 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
CPNE4-206ENST00000505957 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-206ENST00000505957 ANKRD2Q9GZV1 360 aa13.46□□□□□ -0.25
CPNE4-206ENST00000505957 H7C1W4 665 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 RLBP1P12271 317 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
CPNE4-206ENST00000505957 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 FTSJ3Q8IY81 847 aaKnown RBP13.45□□□□□ -0.26
CPNE4-206ENST00000505957 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 FBXW7Q969H0 707 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
CPNE4-206ENST00000505957 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
CPNE4-206ENST00000505957 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
CPNE4-206ENST00000505957 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
CPNE4-206ENST00000505957 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 SASH1O94885 1247 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
CPNE4-206ENST00000505957 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
CPNE4-206ENST00000505957 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 R3HDMLQ9H3Y0 253 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
CPNE4-206ENST00000505957 PTPRCP08575 1304 aa13.43□□□□□ -0.26
CPNE4-206ENST00000505957 ZBTB48P10074 688 aaPredicted RBP13.43□□□□□ -0.26
CPNE4-206ENST00000505957 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
CPNE4-206ENST00000505957 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
CPNE4-206ENST00000505957 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
CPNE4-206ENST00000505957 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
CPNE4-206ENST00000505957 ANGEL1Q9UNK9 670 aaKnown RBP13.43□□□□□ -0.26
CPNE4-206ENST00000505957 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
CPNE4-206ENST00000505957 PPP2R3BQ9Y5P8 575 aa13.43□□□□□ -0.26
CPNE4-206ENST00000505957 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
CPNE4-206ENST00000505957 CSF1RP07333 972 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 ITGA6P23229 1130 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 GTF2IP78347 998 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 PRKG1Q13976 671 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
CPNE4-206ENST00000505957 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
CPNE4-206ENST00000505957 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
CPNE4-206ENST00000505957 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
CPNE4-206ENST00000505957 KLRK1P26718 216 aa13.41□□□□□ -0.26
CPNE4-206ENST00000505957 DLGAP5Q15398 846 aa13.41□□□□□ -0.26
CPNE4-206ENST00000505957 C15orf52Q6ZUT6 534 aaKnown RBP13.41□□□□□ -0.26
CPNE4-206ENST00000505957 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
CPNE4-206ENST00000505957 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
CPNE4-206ENST00000505957 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
CPNE4-206ENST00000505957 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
CPNE4-206ENST00000505957 CASP7P55210 303 aa13.4□□□□□ -0.26
CPNE4-206ENST00000505957 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
CPNE4-206ENST00000505957 CHRNDQ07001 517 aa13.4□□□□□ -0.26
CPNE4-206ENST00000505957 GCKRQ14397 625 aa13.4□□□□□ -0.26
CPNE4-206ENST00000505957 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
CPNE4-206ENST00000505957 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
CPNE4-206ENST00000505957 KCNJ4P48050 445 aa13.39□□□□□ -0.27
CPNE4-206ENST00000505957 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
CPNE4-206ENST00000505957 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
CPNE4-206ENST00000505957 TRIM17Q9Y577 477 aa13.39□□□□□ -0.27
CPNE4-206ENST00000505957 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPNE4-206ENST00000505957 MYO1BO43795 1136 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 IL1R1P14778 569 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 G2E3Q7L622 706 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 CERS5Q8N5B7 392 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 ERO1AQ96HE7 468 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 MYH3P11055 1940 aa13.38□□□□□ -0.27
CPNE4-206ENST00000505957 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
CPNE4-206ENST00000505957 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 IREB2P48200 963 aaKnown RBP13.37□□□□□ -0.27
CPNE4-206ENST00000505957 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
CPNE4-206ENST00000505957 FLIIQ13045 1269 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 ZNF804AQ7Z570 1209 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 ITPRIPQ8IWB1 547 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
CPNE4-206ENST00000505957 PRMT6Q96LA8 375 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms