RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 GNL3LQ9NVN8 582 aaKnown RBP19.18■□□□□ 0.66
PCDH1-205ENST00000505937 AKAP2Q9Y2D5 859 aa19.18■□□□□ 0.66
PCDH1-205ENST00000505937 FAM205AQ6ZU69 1335 aa19.18■□□□□ 0.66
PCDH1-205ENST00000505937 PSME4Q14997 1843 aa19.17■□□□□ 0.66
PCDH1-205ENST00000505937 EGFRP00533 1210 aa19.17■□□□□ 0.66
PCDH1-205ENST00000505937 BCAMP50895 628 aa19.17■□□□□ 0.66
PCDH1-205ENST00000505937 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
PCDH1-205ENST00000505937 JAG2Q9Y219 1238 aa19.17■□□□□ 0.66
PCDH1-205ENST00000505937 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
PCDH1-205ENST00000505937 HTRA3P83110 453 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 SCARF1Q14162 830 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 KRT26Q7Z3Y9 468 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 SULF1Q8IWU6 871 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 TBC1D22AQ8WUA7 517 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 GLIS2Q9BZE0 524 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-205ENST00000505937 GGA3Q9NZ52 723 aa19.16■□□□□ 0.66
PCDH1-205ENST00000505937 CEP350Q5VT06 3117 aa19.15■□□□□ 0.66
PCDH1-205ENST00000505937 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-205ENST00000505937 POLA2Q14181 598 aa19.15■□□□□ 0.66
PCDH1-205ENST00000505937 SSH3Q8TE77 659 aa19.15■□□□□ 0.66
PCDH1-205ENST00000505937 IQSEC3Q9UPP2 1182 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-205ENST00000505937 F8W031 263 aaPredicted RBP19.14■□□□□ 0.65
PCDH1-205ENST00000505937 TRAF5O00463 557 aa19.14■□□□□ 0.65
PCDH1-205ENST00000505937 TFCP2Q12800 502 aa19.14■□□□□ 0.65
PCDH1-205ENST00000505937 USP48Q86UV5 1035 aa19.14■□□□□ 0.65
PCDH1-205ENST00000505937 CERS5Q8N5B7 392 aa19.14■□□□□ 0.65
PCDH1-205ENST00000505937 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
PCDH1-205ENST00000505937 DLGAP5Q15398 846 aa19.13■□□□□ 0.65
PCDH1-205ENST00000505937 ANGEL2Q5VTE6 544 aaKnown RBP19.13■□□□□ 0.65
PCDH1-205ENST00000505937 CEP85Q6P2H3 762 aa19.13■□□□□ 0.65
PCDH1-205ENST00000505937 PITPNM2Q9BZ72 1349 aa19.12■□□□□ 0.65
PCDH1-205ENST00000505937 A0A1B0GUL7 405 aa19.12■□□□□ 0.65
PCDH1-205ENST00000505937 WNT10BO00744 389 aa19.12■□□□□ 0.65
PCDH1-205ENST00000505937 HMMRO75330 724 aa19.12■□□□□ 0.65
PCDH1-205ENST00000505937 CELF2O95319 508 aaKnown RBP19.12■□□□□ 0.65
PCDH1-205ENST00000505937 KLRG1Q96E93 195 aa19.12■□□□□ 0.65
PCDH1-205ENST00000505937 ABT1Q9ULW3 272 aaKnown RBP19.12■□□□□ 0.65
PCDH1-205ENST00000505937 TTF2Q9UNY4 1162 aaKnown RBP19.12■□□□□ 0.65
PCDH1-205ENST00000505937 SEMA3EO15041 775 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 MYO1BO43795 1136 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 RBM5P52756 815 aaKnown RBP eCLIP19.11■□□□□ 0.65
PCDH1-205ENST00000505937 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 GORABQ5T7V8 394 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 DNAJC5GQ8N7S2 189 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 WDR66Q8TBY9 1149 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 NEUROD6Q96NK8 337 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 ZNF408Q9H9D4 720 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
PCDH1-205ENST00000505937 TIMM10P62072 90 aa19.1■□□□□ 0.65
PCDH1-205ENST00000505937 CFAP100Q494V2 611 aa19.1■□□□□ 0.65
PCDH1-205ENST00000505937 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
PCDH1-205ENST00000505937 MTMR14Q8NCE2 650 aa19.1■□□□□ 0.65
PCDH1-205ENST00000505937 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
PCDH1-205ENST00000505937 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
PCDH1-205ENST00000505937 SUGT1Q9Y2Z0 365 aa19.1■□□□□ 0.65
PCDH1-205ENST00000505937 MAST3O60307 1309 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 ASTN2O75129 1339 aaPredicted RBP19.09■□□□□ 0.65
PCDH1-205ENST00000505937 ADM5C9JUS6 153 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 ADORA1P30542 326 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 FMR1Q06787 632 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCDH1-205ENST00000505937 HSP90AB4PQ58FF6 505 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 CCDC102BQ68D86 513 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 APOBEC3FQ8IUX4 373 aaKnown RBP19.09■□□□□ 0.65
PCDH1-205ENST00000505937 XAGE2Q96GT9 111 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 SERPINA10Q9UK55 444 aa19.09■□□□□ 0.65
PCDH1-205ENST00000505937 PHKA1P46020 1223 aa19.08■□□□□ 0.64
PCDH1-205ENST00000505937 C20orf194Q5TEA3 1177 aa19.08■□□□□ 0.64
PCDH1-205ENST00000505937 GPR108Q9NPR9 543 aa19.08■□□□□ 0.64
PCDH1-205ENST00000505937 MKRN1Q9UHC7 482 aaKnown RBP19.08■□□□□ 0.64
PCDH1-205ENST00000505937 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
PCDH1-205ENST00000505937 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
PCDH1-205ENST00000505937 CST9Q5W186 159 aa19.07■□□□□ 0.64
PCDH1-205ENST00000505937 ZGPATQ8N5A5 531 aaKnown RBP19.07■□□□□ 0.64
PCDH1-205ENST00000505937 ZBED3Q96IU2 234 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-205ENST00000505937 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
PCDH1-205ENST00000505937 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
PCDH1-205ENST00000505937 HDLBPQ00341 1268 aaKnown RBP19.06■□□□□ 0.64
PCDH1-205ENST00000505937 DEFB115Q30KQ5 88 aa19.06■□□□□ 0.64
PCDH1-205ENST00000505937 C2orf69Q8N8R5 385 aa19.06■□□□□ 0.64
PCDH1-205ENST00000505937 TEKT1Q969V4 418 aa19.06■□□□□ 0.64
PCDH1-205ENST00000505937 ZNF646O15015 1829 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-205ENST00000505937 RASSF10A6NK89 507 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 ZBTB22O15209 634 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 NF2P35240 595 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 CRKP46108 304 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 TNNI3KQ59H18 835 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 PAXIP1Q6ZW49 1069 aaPredicted RBP19.05■□□□□ 0.64
PCDH1-205ENST00000505937 CDCA5Q96FF9 252 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 TLL2Q9Y6L7 1015 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 FPGT-TNNI3KV9GXZ4 949 aa19.05■□□□□ 0.64
PCDH1-205ENST00000505937 ECE1P42892 770 aa19.04■□□□□ 0.64
PCDH1-205ENST00000505937 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
PCDH1-205ENST00000505937 PRMT6Q96LA8 375 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-205ENST00000505937 VEZTQ9HBM0 779 aa19.04■□□□□ 0.64
PCDH1-205ENST00000505937 GBA2Q9HCG7 927 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-205ENST00000505937 EXOC6BQ9Y2D4 811 aa19.04■□□□□ 0.64
PCDH1-205ENST00000505937 PDS5AQ29RF7 1337 aaKnown RBP19.03■□□□□ 0.64
PCDH1-205ENST00000505937 LDHBP07195 334 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms