RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CDC25BP30305 580 aa6.98□□□□□ -1.29
CHD1-203ENST00000505657 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
CHD1-203ENST00000505657 TAGLNQ01995 201 aaKnown RBP6.98□□□□□ -1.29
CHD1-203ENST00000505657 KIAA0319Q5VV43 1072 aa6.98□□□□□ -1.29
CHD1-203ENST00000505657 BHLHE41Q9C0J9 482 aaPredicted RBP6.98□□□□□ -1.29
CHD1-203ENST00000505657 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
CHD1-203ENST00000505657 LIN7BQ9HAP6 207 aa6.98□□□□□ -1.29
CHD1-203ENST00000505657 DEAF1O75398 565 aaPredicted RBP6.97□□□□□ -1.29
CHD1-203ENST00000505657 PTPRAP18433 802 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 CDC27P30260 824 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 GRIA4P48058 902 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 GRM2Q14416 872 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 SPRED3Q2MJR0 410 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.97□□□□□ -1.29
CHD1-203ENST00000505657 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 TXNRD3Q86VQ6 643 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 CCNJLQ8IV13 435 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 ASAP3Q8TDY4 903 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 TP53INP1Q96A56 240 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 MUC3BQ9H195 1237 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 EHD4Q9H223 541 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 GOLGA2P5Q9HBQ8 144 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 SOX13Q9UN79 622 aa6.97□□□□□ -1.29
CHD1-203ENST00000505657 LINC01387J3KSC0 135 aa6.96□□□□□ -1.3
CHD1-203ENST00000505657 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
CHD1-203ENST00000505657 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.3
CHD1-203ENST00000505657 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
CHD1-203ENST00000505657 FBXO33Q7Z6M2 555 aa6.96□□□□□ -1.3
CHD1-203ENST00000505657 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.3
CHD1-203ENST00000505657 LENG1Q96BZ8 264 aaPredicted RBP6.96□□□□□ -1.3
CHD1-203ENST00000505657 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
CHD1-203ENST00000505657 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
CHD1-203ENST00000505657 TM4SF5O14894 197 aa6.95□□□□□ -1.3
CHD1-203ENST00000505657 ELNP15502 786 aa6.95□□□□□ -1.3
CHD1-203ENST00000505657 VN1R5Q7Z5H4 357 aa6.95□□□□□ -1.3
CHD1-203ENST00000505657 PPME1Q9Y570 386 aa6.95□□□□□ -1.3
CHD1-203ENST00000505657 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
CHD1-203ENST00000505657 PRPF40BQ6NWY9 871 aaKnown RBP6.94□□□□□ -1.3
CHD1-203ENST00000505657 GALNT11Q8NCW6 608 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 BSNDQ8WZ55 320 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 CARD10Q9BWT7 1032 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 BCO2Q9BYV7 579 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 OSBPL7Q9BZF2 842 aa6.94□□□□□ -1.3
CHD1-203ENST00000505657 A0A096LPE4 126 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 A0A1W2PPZ6 126 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 NRG1Q02297 640 aaPredicted RBP6.93□□□□□ -1.3
CHD1-203ENST00000505657 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 NXPE4Q6UWF7 544 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 FBF1Q8TES7 1133 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 DUSP9Q99956 384 aaKnown RBP6.93□□□□□ -1.3
CHD1-203ENST00000505657 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
CHD1-203ENST00000505657 NLRP2Q9NX02 1062 aa6.93□□□□□ -1.3
CHD1-203ENST00000505657 H3BRJ5 948 aa6.92□□□□□ -1.3
CHD1-203ENST00000505657 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
CHD1-203ENST00000505657 RAC1P63000 192 aa6.92□□□□□ -1.3
CHD1-203ENST00000505657 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
CHD1-203ENST00000505657 CACTIN-AS1Q8N1I8 211 aa6.92□□□□□ -1.3
CHD1-203ENST00000505657 ZNF576Q9H609 170 aa6.92□□□□□ -1.3
CHD1-203ENST00000505657 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 FSCN2O14926 492 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 ITPKAP23677 461 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 FCGRTP55899 365 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 FAM161BQ96MY7 647 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 USP21Q9UK80 565 aa6.91□□□□□ -1.3
CHD1-203ENST00000505657 DLL1O00548 723 aa6.9□□□□□ -1.3
CHD1-203ENST00000505657 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CHD1-203ENST00000505657 ESRRAP11474 423 aaPredicted RBP6.9□□□□□ -1.3
CHD1-203ENST00000505657 ERCC3P19447 782 aa6.9□□□□□ -1.3
CHD1-203ENST00000505657 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
CHD1-203ENST00000505657 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
CHD1-203ENST00000505657 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
CHD1-203ENST00000505657 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
CHD1-203ENST00000505657 ADAM11O75078 769 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 WISP1O95388 367 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 CABP4P57796 275 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 IKBKEQ14164 716 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 MCTP1Q6DN14 999 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 C3orf58Q8NDZ4 430 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
CHD1-203ENST00000505657 KLHDC7BQ96G42 594 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 C12orf49Q9H741 205 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
CHD1-203ENST00000505657 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 GNA15P30679 374 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 PIP4K2BP78356 416 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 CLEC4MQ9H2X3 399 aaPredicted RBP6.88□□□□□ -1.31
CHD1-203ENST00000505657 SEC31BQ9NQW1 1179 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 SPG7Q9UQ90 795 aa6.88□□□□□ -1.31
CHD1-203ENST00000505657 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms