RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 GMLQ99445 158 aa15.3■□□□□ 0.04
SNCA-208ENST00000505199 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
SNCA-208ENST00000505199 RAD17O75943 681 aa15.29■□□□□ 0.04
SNCA-208ENST00000505199 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
SNCA-208ENST00000505199 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
SNCA-208ENST00000505199 MRIQ9BWK5 157 aa15.29■□□□□ 0.04
SNCA-208ENST00000505199 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
SNCA-208ENST00000505199 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
SNCA-208ENST00000505199 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 DDNO94850 711 aaPredicted RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 IFIT2P09913 472 aaKnown RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 SCNN1DP51172 638 aa15.28■□□□□ 0.04
SNCA-208ENST00000505199 HDLBPQ00341 1268 aaKnown RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 AACSQ86V21 672 aa15.28■□□□□ 0.04
SNCA-208ENST00000505199 OGFOD1Q8N543 542 aa15.28■□□□□ 0.04
SNCA-208ENST00000505199 ZNF784Q8NCA9 323 aaPredicted RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
SNCA-208ENST00000505199 DBNLQ9UJU6 430 aaKnown RBP15.28■□□□□ 0.04
SNCA-208ENST00000505199 MAST3O60307 1309 aa15.27■□□□□ 0.04
SNCA-208ENST00000505199 USP17L8P0C7I0 530 aa15.27■□□□□ 0.04
SNCA-208ENST00000505199 ZNF280AP59817 542 aaPredicted RBP15.27■□□□□ 0.04
SNCA-208ENST00000505199 GTF2IP78347 998 aa15.27■□□□□ 0.04
SNCA-208ENST00000505199 USP50Q70EL3 339 aaPredicted RBP15.27■□□□□ 0.04
SNCA-208ENST00000505199 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
SNCA-208ENST00000505199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
SNCA-208ENST00000505199 H7C1D1 291 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 ADORA1P30542 326 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 PHKA1P46020 1223 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
SNCA-208ENST00000505199 MFSD14BQ5SR56 506 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
SNCA-208ENST00000505199 ADARB2Q9NS39 739 aaKnown RBP15.26■□□□□ 0.03
SNCA-208ENST00000505199 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
SNCA-208ENST00000505199 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
SNCA-208ENST00000505199 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 MTMR14Q8NCE2 650 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
SNCA-208ENST00000505199 AKAP11Q9UKA4 1901 aa15.24■□□□□ 0.03
SNCA-208ENST00000505199 POTECB2RU33 542 aa15.24■□□□□ 0.03
SNCA-208ENST00000505199 EPHX2P34913 555 aa15.24■□□□□ 0.03
SNCA-208ENST00000505199 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
SNCA-208ENST00000505199 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
SNCA-208ENST00000505199 TAF1DQ9H5J8 278 aaPredicted RBP15.24■□□□□ 0.03
SNCA-208ENST00000505199 CNOT7Q9UIV1 285 aaKnown RBP15.24■□□□□ 0.03
SNCA-208ENST00000505199 SERPINA10Q9UK55 444 aa15.24■□□□□ 0.03
SNCA-208ENST00000505199 IGHDP01880 384 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 ATP5JP18859 108 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 NUCB1Q02818 461 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
SNCA-208ENST00000505199 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
SNCA-208ENST00000505199 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
SNCA-208ENST00000505199 COL1A1P02452 1464 aaPredicted RBP15.22■□□□□ 0.03
SNCA-208ENST00000505199 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 ERC2O15083 957 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 TOMM70O94826 608 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 MCAMP43121 646 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 MICALL2Q8IY33 904 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 PGAP2Q9UHJ9 254 aa15.22■□□□□ 0.03
SNCA-208ENST00000505199 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
SNCA-208ENST00000505199 AOX1Q06278 1338 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 APBB1O00213 710 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 ANKRD45Q5TZF3 282 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 HHIPL2Q6UWX4 724 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 CENPQQ7L2Z9 268 aaPredicted RBP15.21■□□□□ 0.03
SNCA-208ENST00000505199 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 LDHDQ86WU2 507 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 CERS3Q8IU89 383 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 RRAGCQ9HB90 399 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 MYOZ2Q9NPC6 264 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 NMRK2Q9NPI5 230 aa15.21■□□□□ 0.03
SNCA-208ENST00000505199 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
SNCA-208ENST00000505199 SALL3Q9BXA9 1300 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 PITPNM2Q9BZ72 1349 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 KIF3CO14782 793 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 MAP4K4O95819 1239 aaPredicted RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 LDHBP07195 334 aaKnown RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 EPS15P42566 896 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 STAP2Q9UGK3 403 aa15.2■□□□□ 0.02
SNCA-208ENST00000505199 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
SNCA-208ENST00000505199 GLRX3O76003 335 aaKnown RBP15.19■□□□□ 0.02
SNCA-208ENST00000505199 MX1P20591 662 aa15.19■□□□□ 0.02
SNCA-208ENST00000505199 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
SNCA-208ENST00000505199 KIAA0825Q8IV33 1275 aa15.19■□□□□ 0.02
SNCA-208ENST00000505199 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
SNCA-208ENST00000505199 ZBED3Q96IU2 234 aaPredicted RBP15.19■□□□□ 0.02
SNCA-208ENST00000505199 HAUS7Q99871 368 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms