RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 NFKB2Q00653 900 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 DDX10Q13206 875 aaKnown RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 PICALMQ13492 652 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 TTLL5Q6EMB2 1281 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 RTFDC1Q9BY42 306 aaPredicted RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 XPO4Q9C0E2 1151 aaKnown RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 RAI14Q9P0K7 980 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 PGAP2Q9UHJ9 254 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 MCM8Q9UJA3 840 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 GTPBP10A4D1E9 387 aaKnown RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 WASLO00401 505 aaPredicted RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 CHL1O00533 1208 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 TPM2P07951 284 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 TRIM27P14373 513 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 PSMA3P25788 255 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 STAT3P40763 770 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 GUCY2FP51841 1108 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 ZNF132P52740 706 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 PDE1CQ14123 709 aaPredicted RBP8.57□□□□□ -1.04
CDH9-202ENST00000505020 DCTN1Q14203 1278 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 GFOD2Q3B7J2 385 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 CFHR5Q9BXR6 569 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 RBSNQ9H1K0 784 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 CD2APQ9Y5K6 639 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 PES1O00541 588 aaKnown RBP8.56□□□□□ -1.04
CDH9-202ENST00000505020 ANP32AP39687 249 aaKnown RBP8.56□□□□□ -1.04
CDH9-202ENST00000505020 GTF2IP78347 998 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 MAP7D1Q3KQU3 841 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 FAM102BQ5T8I3 360 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 NXNQ6DKJ4 435 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 MZT2AQ6P582 158 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 CSRNP2Q9H175 543 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 COPRSQ9NQ92 184 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
CDH9-202ENST00000505020 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
CDH9-202ENST00000505020 IPO8O15397 1037 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 AGR2O95994 175 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 DDIT3P35638 169 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 SFSWAPQ12872 951 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 PIN1Q13526 163 aaPredicted RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 TCEA2Q15560 299 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 WASHC2AQ641Q2 1341 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 ZCCHC8Q6NZY4 707 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 CCDC73Q6ZRK6 1079 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 USP31Q70CQ4 1352 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 MAGEB6Q8N7X4 407 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 ALKBH8Q96BT7 664 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 TBC1D31Q96DN5 1066 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 STRBPQ96SI9 672 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 RANBP17Q9H2T7 1088 aaKnown RBP8.55□□□□□ -1.04
CDH9-202ENST00000505020 MSRB2Q9Y3D2 182 aa8.55□□□□□ -1.04
CDH9-202ENST00000505020 C19orf81C9J6K1 198 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 BAIAP3O94812 1187 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 BCAMP50895 628 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 IFRD2Q12894 506 aaPredicted RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 BIRC3Q13489 604 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 KIAA1614Q5VZ46 1190 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 ACRBPQ8NEB7 543 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 FBF1Q8TES7 1133 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 CENPTQ96BT3 561 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 TIFAQ96CG3 184 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 CCDC113Q9H0I3 377 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 CHIC2Q9UKJ5 165 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 IPO5O00410 1097 aaKnown RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 PAK3O75914 559 aaPredicted RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 ASMTLO95671 621 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 DNAJB2P25686 324 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 GCGRP47871 477 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 RENBPP51606 427 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH9-202ENST00000505020 APOBRQ0VD83 1088 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 C11orf74Q86VG3 221 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 UBR7Q8N806 425 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 PJA1Q8NG27 643 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 IWS1Q96ST2 819 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 SMAD5Q99717 465 aaKnown RBP8.54□□□□□ -1.04
CDH9-202ENST00000505020 CNNM2Q9H8M5 875 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
CDH9-202ENST00000505020 SLC5A1P13866 664 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 IFT88Q13099 833 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
CDH9-202ENST00000505020 DACT2Q5SW24 774 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 BRSK2Q8IWQ3 736 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 NKAIN3Q8N8D7 197 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 PLCB1Q9NQ66 1216 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms