RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 TFCP2Q12800 502 aa25.57■■□□□ 1.68
DDR1-255ENST00000504927 TBC1D10BQ4KMP7 808 aaPredicted RBP25.57■■□□□ 1.68
DDR1-255ENST00000504927 TRPM4Q8TD43 1214 aa25.57■■□□□ 1.68
DDR1-255ENST00000504927 MXD3Q9BW11 206 aa25.57■■□□□ 1.68
DDR1-255ENST00000504927 HDAC9Q9UKV0 1011 aa25.57■■□□□ 1.68
DDR1-255ENST00000504927 PSME4Q14997 1843 aa25.57■■□□□ 1.68
DDR1-255ENST00000504927 ZNF646O15015 1829 aaPredicted RBP25.56■■□□□ 1.68
DDR1-255ENST00000504927 RBM26Q5T8P6 1007 aaKnown RBP25.56■■□□□ 1.68
DDR1-255ENST00000504927 MAP1SQ66K74 1059 aaPredicted RBP25.56■■□□□ 1.68
DDR1-255ENST00000504927 GNL3LQ9NVN8 582 aaKnown RBP25.56■■□□□ 1.68
DDR1-255ENST00000504927 HMMRO75330 724 aa25.55■■□□□ 1.68
DDR1-255ENST00000504927 ITGBL1O95965 494 aaPredicted RBP25.55■■□□□ 1.68
DDR1-255ENST00000504927 OS9Q13438 667 aaPredicted RBP25.55■■□□□ 1.68
DDR1-255ENST00000504927 KIF4BQ2VIQ3 1234 aa25.55■■□□□ 1.68
DDR1-255ENST00000504927 MYOZ2Q9NPC6 264 aa25.55■■□□□ 1.68
DDR1-255ENST00000504927 TIMM10P62072 90 aa25.54■■□□□ 1.68
DDR1-255ENST00000504927 TBC1D22AQ8WUA7 517 aa25.54■■□□□ 1.68
DDR1-255ENST00000504927 A0A1B0GUL7 405 aa25.53■■□□□ 1.68
DDR1-255ENST00000504927 ZBTB22O15209 634 aa25.53■■□□□ 1.68
DDR1-255ENST00000504927 HSP90AB4PQ58FF6 505 aa25.53■■□□□ 1.68
DDR1-255ENST00000504927 KIAA0825Q8IV33 1275 aa25.53■■□□□ 1.68
DDR1-255ENST00000504927 GPR108Q9NPR9 543 aa25.53■■□□□ 1.68
DDR1-255ENST00000504927 EGFRP00533 1210 aa25.52■■□□□ 1.68
DDR1-255ENST00000504927 MFSD14BQ5SR56 506 aa25.52■■□□□ 1.68
DDR1-255ENST00000504927 CERS5Q8N5B7 392 aa25.52■■□□□ 1.68
DDR1-255ENST00000504927 IQSEC3Q9UPP2 1182 aaPredicted RBP25.52■■□□□ 1.68
DDR1-255ENST00000504927 PASKQ96RG2 1323 aa25.52■■□□□ 1.68
DDR1-255ENST00000504927 CDC37L1Q7L3B6 337 aa25.51■■□□□ 1.67
DDR1-255ENST00000504927 ERC1Q8IUD2 1116 aa25.51■■□□□ 1.67
DDR1-255ENST00000504927 DNAJC5GQ8N7S2 189 aa25.51■■□□□ 1.67
DDR1-255ENST00000504927 DCPSQ96C86 337 aaKnown RBP25.51■■□□□ 1.67
DDR1-255ENST00000504927 NEUROD6Q96NK8 337 aa25.51■■□□□ 1.67
DDR1-255ENST00000504927 JAG2Q9Y219 1238 aa25.51■■□□□ 1.67
DDR1-255ENST00000504927 SEMA3EO15041 775 aa25.5■■□□□ 1.67
DDR1-255ENST00000504927 SCARF1Q14162 830 aa25.5■■□□□ 1.67
DDR1-255ENST00000504927 XAGE2Q96GT9 111 aa25.5■■□□□ 1.67
DDR1-255ENST00000504927 PCNTO95613 3336 aa25.49■■□□□ 1.67
DDR1-255ENST00000504927 CHAF1AQ13111 956 aaPredicted RBP25.49■■□□□ 1.67
DDR1-255ENST00000504927 CCDC102BQ68D86 513 aa25.49■■□□□ 1.67
DDR1-255ENST00000504927 WDR66Q8TBY9 1149 aa25.49■■□□□ 1.67
DDR1-255ENST00000504927 DENND2AQ9ULE3 1009 aa25.49■■□□□ 1.67
DDR1-255ENST00000504927 SUGT1Q9Y2Z0 365 aa25.49■■□□□ 1.67
DDR1-255ENST00000504927 ADORA1P30542 326 aa25.48■■□□□ 1.67
DDR1-255ENST00000504927 GORABQ5T7V8 394 aa25.48■■□□□ 1.67
DDR1-255ENST00000504927 SIRT2Q8IXJ6 389 aa25.48■■□□□ 1.67
DDR1-255ENST00000504927 MTMR14Q8NCE2 650 aa25.48■■□□□ 1.67
DDR1-255ENST00000504927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.48■■□□□ 1.67
DDR1-255ENST00000504927 PHKA1P46020 1223 aa25.47■■□□□ 1.67
DDR1-255ENST00000504927 FMR1Q06787 632 aaKnown RBP eCLIP25.47■■□□□ 1.673e-7■■■□□ 15.5
DDR1-255ENST00000504927 F8W031 263 aaPredicted RBP25.46■■□□□ 1.67
DDR1-255ENST00000504927 WNT10BO00744 389 aa25.46■■□□□ 1.67
DDR1-255ENST00000504927 DLGAP5Q15398 846 aa25.46■■□□□ 1.67
DDR1-255ENST00000504927 TNNI3KQ59H18 835 aa25.46■■□□□ 1.67
DDR1-255ENST00000504927 FPGT-TNNI3KV9GXZ4 949 aa25.46■■□□□ 1.67
DDR1-255ENST00000504927 PITPNM2Q9BZ72 1349 aa25.45■■□□□ 1.66
DDR1-255ENST00000504927 KRT26Q7Z3Y9 468 aa25.45■■□□□ 1.66
DDR1-255ENST00000504927 MRIQ9BWK5 157 aa25.45■■□□□ 1.66
DDR1-255ENST00000504927 CREBZFQ9NS37 354 aa25.45■■□□□ 1.66
DDR1-255ENST00000504927 TTF2Q9UNY4 1162 aaKnown RBP25.45■■□□□ 1.66
DDR1-255ENST00000504927 EXOC6BQ9Y2D4 811 aa25.45■■□□□ 1.66
DDR1-255ENST00000504927 TMEM88BA6NKF7 163 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 TRAF5O00463 557 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 NBPF9Q3BBW0 867 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 ANGEL2Q5VTE6 544 aaKnown RBP25.44■■□□□ 1.66
DDR1-255ENST00000504927 USP48Q86UV5 1035 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 SULF1Q8IWU6 871 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 ZBED3Q96IU2 234 aaPredicted RBP25.44■■□□□ 1.66
DDR1-255ENST00000504927 GLIS2Q9BZE0 524 aaPredicted RBP25.44■■□□□ 1.66
DDR1-255ENST00000504927 GGA3Q9NZ52 723 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 SERPINA10Q9UK55 444 aa25.44■■□□□ 1.66
DDR1-255ENST00000504927 PDS5AQ29RF7 1337 aaKnown RBP25.43■■□□□ 1.66
DDR1-255ENST00000504927 RAB11FIP3O75154 756 aa25.43■■□□□ 1.66
DDR1-255ENST00000504927 HDLBPQ00341 1268 aaKnown RBP25.43■■□□□ 1.66
DDR1-255ENST00000504927 MAST3O60307 1309 aa25.42■■□□□ 1.66
DDR1-255ENST00000504927 MYO1BO43795 1136 aa25.42■■□□□ 1.66
DDR1-255ENST00000504927 CFAP100Q494V2 611 aa25.42■■□□□ 1.66
DDR1-255ENST00000504927 CCDC158Q5M9N0 1113 aa25.42■■□□□ 1.66
DDR1-255ENST00000504927 ZGPATQ8N5A5 531 aaKnown RBP25.42■■□□□ 1.66
DDR1-255ENST00000504927 SALL1Q9NSC2 1324 aa25.41■■□□□ 1.66
DDR1-255ENST00000504927 UQCRFS1P1P0C7P4 283 aa25.41■■□□□ 1.66
DDR1-255ENST00000504927 RBM5P52756 815 aaKnown RBP eCLIP25.41■■□□□ 1.66
DDR1-255ENST00000504927 AAMPQ13685 434 aa25.41■■□□□ 1.66
DDR1-255ENST00000504927 RHPN1Q8TCX5 695 aa25.41■■□□□ 1.66
DDR1-255ENST00000504927 KIF1BPQ96EK5 621 aa25.41■■□□□ 1.66
DDR1-255ENST00000504927 ASTN2O75129 1339 aaPredicted RBP25.4■■□□□ 1.66
DDR1-255ENST00000504927 SPDYE2BA6NHP3 402 aa25.4■■□□□ 1.66
DDR1-255ENST00000504927 SPDYE6P0CI01 402 aa25.4■■□□□ 1.66
DDR1-255ENST00000504927 KLRG1Q96E93 195 aa25.4■■□□□ 1.66
DDR1-255ENST00000504927 ARID4AP29374 1257 aaPredicted RBP25.39■■□□□ 1.66
DDR1-255ENST00000504927 RASGRF1Q13972 1273 aa25.39■■□□□ 1.66
DDR1-255ENST00000504927 EAF2Q96CJ1 260 aaPredicted RBP25.39■■□□□ 1.66
DDR1-255ENST00000504927 PRMT6Q96LA8 375 aaPredicted RBP25.39■■□□□ 1.66
DDR1-255ENST00000504927 CRBNQ96SW2 442 aa25.39■■□□□ 1.66
DDR1-255ENST00000504927 CRKP46108 304 aa25.38■■□□□ 1.65
DDR1-255ENST00000504927 CST9Q5W186 159 aa25.38■■□□□ 1.65
DDR1-255ENST00000504927 DLK2Q6UY11 383 aa25.38■■□□□ 1.65
DDR1-255ENST00000504927 CLASRPQ8N2M8 674 aaKnown RBP25.38■■□□□ 1.65
DDR1-255ENST00000504927 TEKT1Q969V4 418 aa25.38■■□□□ 1.65
DDR1-255ENST00000504927 ZNF512BQ96KM6 892 aaPredicted RBP25.38■■□□□ 1.65
DDR1-255ENST00000504927 DBNDD2Q9BQY9 259 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms