RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SYCE3A1L190 88 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 FIBPO43427 364 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 PDE6AP16499 860 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 ZNF532Q9HCE3 1301 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 JAK2O60674 1132 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 MCM5P33992 734 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 EVCP57679 992 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 KRT85P78386 507 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 MAP3K12Q12852 859 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 NCOA7Q8NI08 942 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
SNCAIP-207ENST00000504884 TCRBV5S4A2TA0A5A2 114 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 HAND2P61296 217 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 CHRNDQ07001 517 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 SLC10A5Q5PT55 438 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 ARAP2Q8WZ64 1704 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 PDIA3P30101 505 aaKnown RBP18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 RASGRF1Q13972 1273 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 RBSNQ9H1K0 784 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
SNCAIP-207ENST00000504884 LAMB2P55268 1798 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 SNAP23O00161 211 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 KCNQ4P56696 695 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 CHST3Q7LGC8 479 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 PTF1AQ7RTS3 328 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 NSUN7Q8NE18 718 aaKnown RBP18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
SNCAIP-207ENST00000504884 H3BQV1 296 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 BCAMP50895 628 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 ALX1Q15699 326 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 CCDC183Q5T5S1 534 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 IFFO2Q5TF58 517 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 FERMT3Q86UX7 667 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 MB21D2Q8IYB1 491 aaPredicted RBP18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 ZSCAN16Q9H4T2 348 aaPredicted RBP18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 PRC1O43663 620 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 APPP05067 770 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 TRDNQ13061 729 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 SCAND2PQ9GZW5 306 aaPredicted RBP18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 BCL2L12Q9HB09 334 aa18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
SNCAIP-207ENST00000504884 ELP1O95163 1332 aa18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 PATL2C9JE40 543 aaKnown RBP18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 ZPR1O75312 459 aa18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 CCT2P78371 535 aaKnown RBP18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 CCDC173Q0VFZ6 552 aa18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
SNCAIP-207ENST00000504884 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 MAGEB6Q8N7X4 407 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 NAP1L2Q9ULW6 460 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 NAA16Q6N069 864 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 GJD4Q96KN9 370 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 RTCBQ9Y3I0 505 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-207ENST00000504884 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
SNCAIP-207ENST00000504884 NLRP3Q96P20 1036 aa18.15■□□□□ 0.5
SNCAIP-207ENST00000504884 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
SNCAIP-207ENST00000504884 GNPATO15228 680 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 GNAT2P19087 354 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 RESTQ13127 1097 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 FAM173BQ6P4H8 233 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 C3orf67Q6ZVT6 689 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 SALL1Q9NSC2 1324 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 ANTXR2P58335 489 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 TRIM44Q96DX7 344 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-207ENST00000504884 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 SPATA32Q96LK8 384 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms